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The map label for this gene is cbpF

Identifier: 116515867

GI number: 116515867

Start: 358922

End: 359806

Strand: Direct

Name: cbpF

Synonym: SPD_0357

Alternate gene names: NA

Gene position: 358922-359806 (Clockwise)

Preceding gene: 116516504

Following gene: 116515741

Centisome position: 17.54

GC content: 40.56

Gene sequence:

>885_bases
ATGAAGCTTTTGAAAAAAATGATGCAAGTCGCACTAGCCACATTTTTCTTCGGTTTGCTAGGGACCAGTACAGTATTTGC
AGATGATTCTGAAGGATGGCAGTTTGTCCAAGAAAATGGTAGAACCTACTACAAAAAGGGGGCTCTAAAAGAAACCTACT
GGAGAGTGATAGATGGGAAGTACTATTATTTTGATCCTTTATCCGGAGAGATGGTTGTCGGCTGGCAATATATACCTGCT
CCACACAAGGGGGTTACGATTGGTCCTTCTCCAAGAATAGAGATTGCTCTTAGACCAGATTGGTTTTATTTTGGTCAAGA
TGGTGTCTTACAAGAATTTGTTGGCAAGCAAGTTTTAGAAGCAAAAACTGCTACGAATACCAACAAACATCATGGGGAAG
AATATGATAGCCAAGCAGAGAAACGAGTCTATTATTTTGAAGATCAGCGTAGTTATCATACTTTAAAAACTGGTTGGATT
TATGAAGAGGGTTATTGGTATTATTTACAGAAGGATGGTGGCTTTGATTCTCGCATCAACAGATTGACGGTTGGAGAGCT
AGCACGTGGTTGGGTTAAGGATTACCCTCTTACGTATGATGAAGAGAAGCTAAAAGCAGCTCCATGGTACTATCTAGATC
CAGCAACTGGCTGGCAAAACCTTGGGAACAAATGGTACTATCTCCGTTCATCAGGAGCTATGGCAACTGGTTGGTATCAG
GAAGGTTCGACTTGGTACTATCTAAATGCAAGTAATGGAGATATGAAAACAGGCTGGTTCCAAGTCAATGGTAACTGGTA
CTATGCCTATGATTCAGGTGCTTTAGCTGTTAATACCACAGTAGGTGGTTACTACTTAAACTATAATGGTGAATGGGTTA
AGTAA

Upstream 100 bases:

>100_bases
TTCAAATGGAGCAATGGTTACAGGTAGCCAAACTATCGATGGTAAAGTTTATAACTTCGCTTCATCTGGTGAGTGGATTT
GATGTTGGAGGATATATAAA

Downstream 100 bases:

>100_bases
TGAAGGCTAATTGTAAACTGTGATGGATACTTAACTTTGTATAATAGGTGGATAAAAGTCTTCACAATCAAAAAACGCAT
AGTATCAAGGTTTTTCTGTA

Product: choline binding protein F

Products: NA

Alternate protein names: Surface Protein PspA; Pneumococcal Surface Protein A; Cell Wall Hydrolase/Autolysin; Collagenolytic Protease; Surface Protein A; Glycoside Hydrolase Family Protein; Lytic Transglycosylase Catalytic; M6 Family Metalloprotease Domain-Containing Protein; Endo-Beta-N-Acetylglucosaminidase; Conserved Repeat Protein; Glycoside Hydrolase Family 3 Protein; Dipeptidase; Dipeptidase B; Glycoside Hydrolase Family; N-Acetylmuramoyl-L-Alanine Amidase; CHAP Domain-Containing Protein; Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosaminidase; Glycosyl Hydrolase Family; Cell Wall Surface Anchor Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKLLKKMMQVALATFFFGLLGTSTVFADDSEGWQFVQENGRTYYKKGALKETYWRVIDGKYYYFDPLSGEMVVGWQYIPA
PHKGVTIGPSPRIEIALRPDWFYFGQDGVLQEFVGKQVLEAKTATNTNKHHGEEYDSQAEKRVYYFEDQRSYHTLKTGWI
YEEGYWYYLQKDGGFDSRINRLTVGELARGWVKDYPLTYDEEKLKAAPWYYLDPATGWQNLGNKWYYLRSSGAMATGWYQ
EGSTWYYLNASNGDMKTGWFQVNGNWYYAYDSGALAVNTTVGGYYLNYNGEWVK

Sequences:

>Translated_294_residues
MKLLKKMMQVALATFFFGLLGTSTVFADDSEGWQFVQENGRTYYKKGALKETYWRVIDGKYYYFDPLSGEMVVGWQYIPA
PHKGVTIGPSPRIEIALRPDWFYFGQDGVLQEFVGKQVLEAKTATNTNKHHGEEYDSQAEKRVYYFEDQRSYHTLKTGWI
YEEGYWYYLQKDGGFDSRINRLTVGELARGWVKDYPLTYDEEKLKAAPWYYLDPATGWQNLGNKWYYLRSSGAMATGWYQ
EGSTWYYLNASNGDMKTGWFQVNGNWYYAYDSGALAVNTTVGGYYLNYNGEWVK
>Mature_294_residues
MKLLKKMMQVALATFFFGLLGTSTVFADDSEGWQFVQENGRTYYKKGALKETYWRVIDGKYYYFDPLSGEMVVGWQYIPA
PHKGVTIGPSPRIEIALRPDWFYFGQDGVLQEFVGKQVLEAKTATNTNKHHGEEYDSQAEKRVYYFEDQRSYHTLKTGWI
YEEGYWYYLQKDGGFDSRINRLTVGELARGWVKDYPLTYDEEKLKAAPWYYLDPATGWQNLGNKWYYLRSSGAMATGWYQ
EGSTWYYLNASNGDMKTGWFQVNGNWYYAYDSGALAVNTTVGGYYLNYNGEWVK

Specific function: Unknown

COG id: COG5263

COG function: function code R; FOG: Glucan-binding domain (YG repeat)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34280; Mature: 34280

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKKMMQVALATFFFGLLGTSTVFADDSEGWQFVQENGRTYYKKGALKETYWRVIDGK
CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCEEEECCCCHHHHHEEECCE
YYYFDPLSGEMVVGWQYIPAPHKGVTIGPSPRIEIALRPDWFYFGQDGVLQEFVGKQVLE
EEEECCCCCCEEEEEEECCCCCCCEEECCCCCEEEEECCCEEEECCCCHHHHHHHHHHHH
AKTATNTNKHHGEEYDSQAEKRVYYFEDQRSYHTLKTGWIYEEGYWYYLQKDGGFDSRIN
HHHCCCCCCCCCCHHHCHHHCEEEEEECCCCEEEEEECEEEECCEEEEEEECCCCHHHHC
RLTVGELARGWVKDYPLTYDEEKLKAAPWYYLDPATGWQNLGNKWYYLRSSGAMATGWYQ
EEEHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCCHHHCCCEEEEEECCCCEEEEEEE
EGSTWYYLNASNGDMKTGWFQVNGNWYYAYDSGALAVNTTVGGYYLNYNGEWVK
CCCEEEEEECCCCCCEEEEEEECCEEEEEECCCCEEEEEEECEEEEECCCCEEC
>Mature Secondary Structure
MKLLKKMMQVALATFFFGLLGTSTVFADDSEGWQFVQENGRTYYKKGALKETYWRVIDGK
CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCEEEECCCCHHHHHEEECCE
YYYFDPLSGEMVVGWQYIPAPHKGVTIGPSPRIEIALRPDWFYFGQDGVLQEFVGKQVLE
EEEECCCCCCEEEEEEECCCCCCCEEECCCCCEEEEECCCEEEECCCCHHHHHHHHHHHH
AKTATNTNKHHGEEYDSQAEKRVYYFEDQRSYHTLKTGWIYEEGYWYYLQKDGGFDSRIN
HHHCCCCCCCCCCHHHCHHHCEEEEEECCCCEEEEEECEEEECCEEEEEEECCCCHHHHC
RLTVGELARGWVKDYPLTYDEEKLKAAPWYYLDPATGWQNLGNKWYYLRSSGAMATGWYQ
EEEHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCCHHHCCCEEEEEECCCCEEEEEEE
EGSTWYYLNASNGDMKTGWFQVNGNWYYAYDSGALAVNTTVGGYYLNYNGEWVK
CCCEEEEEECCCCCCEEEEEEECCEEEEEECCCCEEEEEEECEEEEECCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA