| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515811
Identifier: 116515811
GI number: 116515811
Start: 427313
End: 429199
Strand: Direct
Name: 116515811
Synonym: SPD_0425
Alternate gene names: NA
Gene position: 427313-429199 (Clockwise)
Preceding gene: 116515962
Following gene: 116516902
Centisome position: 20.88
GC content: 34.13
Gene sequence:
>1887_bases ATGGTTATCAGAGTATTTGATCAACAGAAAAATACTTATTCTAGCTTTGCCTTAGAGGAATTAAGTTACTATATGAATCG GGTCTTTAAGACTAACATAGAGCTTGTCGAGGAGAAGGAAGCGGATATTTTTGTAGGATTAGTCAATAAAGAGGACAGAA AAGACCATGTTCTTATCTCATTAGACAAGGGTAAGGGAAGAATTGAGTCTAATACAATTGTAGGTTTACTTATTGGAATT TACCGAATGTTTCATGAATTTGGGGTTGTGTATACTAGACCAGGGCGCAGACATGACTTTGTTCCAGAGTTACGATTTGA AGATTTTTTAGATAAACAGCTATCTATAGATGAAACAGCCAGTTACTATCATAGGGGAGTATGTATAGAGGGAGCGGATT CATTTGAAAATATACTAGATTTCATTGATTGGCTACCTAAGATTGGGATGAACAGTTTTTTCATCCAGTTTGAAAATCCT TACTCTTTTTTGAAACGTTGGTATGAACATGAATTTAATCCATATCTAAATAAAGAACAATTTTCAAATGAATTAGTACA AGAATTGAGTGATAGGTTGGATAAAGAATTGCAAAAAAGAGGTCTTATTCATCATCGTGTTGGTCATGGATGGACAGGTG AAGTTTTAGGTTACTCTTCAAAATTTGGCTGGGAATCAGGTCTTAGTATTTCAGAGGAGAAGAAACCCTATGTCGCTGAA ATAAACGGGAAACGAGAATTGTTTAATACGGCTCCGATTTTAACCAGCCTGGATTTTTCAAATCCAGATGTAGCTGATAA GATGGTAGAAATTATCAAGGATTATGCCAAGAAAAGACCTGATGTTAACTACTTACATATATGGTTGTCGGATGCTCGTA ATAATATCTGTGAATGCGAAAACTGTAGACAAGAATTGGTTTCGGATCAGTATATTCGTATTCTCAATCAATTGGATAGG GCTTTAACGAGTGAGGGATTAGATACAAAGATTTGTTTTCTGCTTTACCATGAGTTGTTATGGGCACCTCAGAAAGAAAA ATTAGATAATCCTGAACGCTTTACCATGATGTTTGCACCGATTACAAGAACATTTGAAATGAGTTATGCAGATGTAGATT TTGACAATTCCATACCTACGCCTAAACCTTATATGCGTAATAAAATTATACTTCCGAATTCTCTTGAGGAAAATTTATCT TATCTTTTTGAGTGGCAAAAAGCATTTAAAGGAGATAGTTTCGTATATGACTATCCTTTAGGGCGTGCTCATTATGGCGA TTTAGGCTATATGAAAATTAGTCAAACTATTTACAGAGATGTATCTTATCTTTCAAACCTACATTTGAATGGGTACATTT CGTGTCAAGAATTACGTGCCGGATTCCCTCATAATTTTCCTAATTATGTCATGGGGCAAATGCTCTGGAAGAAGACAAGA AGTTATGAAGAATTGATTGAAGAATACTTTTCTGCTTTGTATGGGGAAAATTGGCAGTCTGTTGTTGAATATTTAGAAAA ATTATCCATTTATTCCTCTTGTGACTATTTTAATGCAATTGGCAGTCGTCAAAATGATGTTTTAGCGAATCATTATTATA TAGCTTACAATCTAGCTGATAATTTTTTACCAATTATTGAGGAAAATATTTCTAAGTTATTAAATAGTCAAAAGGATGAA TGGAAACAGCTCAGTTATCATCGTGAATATGTTGTTAAGATGGCGAAGGCTTTATATCTTCAAGCAACTGGAAAAACAAG GCAAGCTCAAGATGAATGGAGAAATGTGTTGAATTATATCCGTGGGCACGAATTGCTATTTCAATCTAATTTGGATGTTT ATCGTGTAATTGAAGTAGCAAAAAATTACGCTGGTTTCCACTTATAA
Upstream 100 bases:
>100_bases GTTTTGATTTTGGTTTCTGTAGCAATTTATTATCCATTCTTCAAAATTGCAGATAAACGCAATCTTGAAAAAGAAAAAGC TACTGTTGGAGGGAAATAAG
Downstream 100 bases:
>100_bases ATCATAAGTATAGAAAATGAACTAAGGTATTCAGAGAAGATTGATCCTAAATATTATGAAATTTAAGGATTTTTAAGATA TTTAGGGTCAACTTTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MVIRVFDQQKNTYSSFALEELSYYMNRVFKTNIELVEEKEADIFVGLVNKEDRKDHVLISLDKGKGRIESNTIVGLLIGI YRMFHEFGVVYTRPGRRHDFVPELRFEDFLDKQLSIDETASYYHRGVCIEGADSFENILDFIDWLPKIGMNSFFIQFENP YSFLKRWYEHEFNPYLNKEQFSNELVQELSDRLDKELQKRGLIHHRVGHGWTGEVLGYSSKFGWESGLSISEEKKPYVAE INGKRELFNTAPILTSLDFSNPDVADKMVEIIKDYAKKRPDVNYLHIWLSDARNNICECENCRQELVSDQYIRILNQLDR ALTSEGLDTKICFLLYHELLWAPQKEKLDNPERFTMMFAPITRTFEMSYADVDFDNSIPTPKPYMRNKIILPNSLEENLS YLFEWQKAFKGDSFVYDYPLGRAHYGDLGYMKISQTIYRDVSYLSNLHLNGYISCQELRAGFPHNFPNYVMGQMLWKKTR SYEELIEEYFSALYGENWQSVVEYLEKLSIYSSCDYFNAIGSRQNDVLANHYYIAYNLADNFLPIIEENISKLLNSQKDE WKQLSYHREYVVKMAKALYLQATGKTRQAQDEWRNVLNYIRGHELLFQSNLDVYRVIEVAKNYAGFHL
Sequences:
>Translated_628_residues MVIRVFDQQKNTYSSFALEELSYYMNRVFKTNIELVEEKEADIFVGLVNKEDRKDHVLISLDKGKGRIESNTIVGLLIGI YRMFHEFGVVYTRPGRRHDFVPELRFEDFLDKQLSIDETASYYHRGVCIEGADSFENILDFIDWLPKIGMNSFFIQFENP YSFLKRWYEHEFNPYLNKEQFSNELVQELSDRLDKELQKRGLIHHRVGHGWTGEVLGYSSKFGWESGLSISEEKKPYVAE INGKRELFNTAPILTSLDFSNPDVADKMVEIIKDYAKKRPDVNYLHIWLSDARNNICECENCRQELVSDQYIRILNQLDR ALTSEGLDTKICFLLYHELLWAPQKEKLDNPERFTMMFAPITRTFEMSYADVDFDNSIPTPKPYMRNKIILPNSLEENLS YLFEWQKAFKGDSFVYDYPLGRAHYGDLGYMKISQTIYRDVSYLSNLHLNGYISCQELRAGFPHNFPNYVMGQMLWKKTR SYEELIEEYFSALYGENWQSVVEYLEKLSIYSSCDYFNAIGSRQNDVLANHYYIAYNLADNFLPIIEENISKLLNSQKDE WKQLSYHREYVVKMAKALYLQATGKTRQAQDEWRNVLNYIRGHELLFQSNLDVYRVIEVAKNYAGFHL >Mature_628_residues MVIRVFDQQKNTYSSFALEELSYYMNRVFKTNIELVEEKEADIFVGLVNKEDRKDHVLISLDKGKGRIESNTIVGLLIGI YRMFHEFGVVYTRPGRRHDFVPELRFEDFLDKQLSIDETASYYHRGVCIEGADSFENILDFIDWLPKIGMNSFFIQFENP YSFLKRWYEHEFNPYLNKEQFSNELVQELSDRLDKELQKRGLIHHRVGHGWTGEVLGYSSKFGWESGLSISEEKKPYVAE INGKRELFNTAPILTSLDFSNPDVADKMVEIIKDYAKKRPDVNYLHIWLSDARNNICECENCRQELVSDQYIRILNQLDR ALTSEGLDTKICFLLYHELLWAPQKEKLDNPERFTMMFAPITRTFEMSYADVDFDNSIPTPKPYMRNKIILPNSLEENLS YLFEWQKAFKGDSFVYDYPLGRAHYGDLGYMKISQTIYRDVSYLSNLHLNGYISCQELRAGFPHNFPNYVMGQMLWKKTR SYEELIEEYFSALYGENWQSVVEYLEKLSIYSSCDYFNAIGSRQNDVLANHYYIAYNLADNFLPIIEENISKLLNSQKDE WKQLSYHREYVVKMAKALYLQATGKTRQAQDEWRNVLNYIRGHELLFQSNLDVYRVIEVAKNYAGFHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74099; Mature: 74099
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRVFDQQKNTYSSFALEELSYYMNRVFKTNIELVEEKEADIFVGLVNKEDRKDHVLIS CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCCCCCCEEEEE LDKGKGRIESNTIVGLLIGIYRMFHEFGVVYTRPGRRHDFVPELRFEDFLDKQLSIDETA EECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHCCHHHHH SYYHRGVCIEGADSFENILDFIDWLPKIGMNSFFIQFENPYSFLKRWYEHEFNPYLNKEQ HHHHCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHH FSNELVQELSDRLDKELQKRGLIHHRVGHGWTGEVLGYSSKFGWESGLSISEEKKPYVAE HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE INGKRELFNTAPILTSLDFSNPDVADKMVEIIKDYAKKRPDVNYLHIWLSDARNNICECE CCCCHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCHH NCRQELVSDQYIRILNQLDRALTSEGLDTKICFLLYHELLWAPQKEKLDNPERFTMMFAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCHHEEEEEEC ITRTFEMSYADVDFDNSIPTPKPYMRNKIILPNSLEENLSYLFEWQKAFKGDSFVYDYPL HHHHHCCCEECCCCCCCCCCCCHHHCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCC GRAHYGDLGYMKISQTIYRDVSYLSNLHLNGYISCQELRAGFPHNFPNYVMGQMLWKKTR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHC SYEELIEEYFSALYGENWQSVVEYLEKLSIYSSCDYFNAIGSRQNDVLANHYYIAYNLAD CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEECEEEEEEECCC NFLPIIEENISKLLNSQKDEWKQLSYHREYVVKMAKALYLQATGKTRQAQDEWRNVLNYI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH RGHELLFQSNLDVYRVIEVAKNYAGFHL CCCCEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MVIRVFDQQKNTYSSFALEELSYYMNRVFKTNIELVEEKEADIFVGLVNKEDRKDHVLIS CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCCCCCCEEEEE LDKGKGRIESNTIVGLLIGIYRMFHEFGVVYTRPGRRHDFVPELRFEDFLDKQLSIDETA EECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHCCHHHHH SYYHRGVCIEGADSFENILDFIDWLPKIGMNSFFIQFENPYSFLKRWYEHEFNPYLNKEQ HHHHCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHH FSNELVQELSDRLDKELQKRGLIHHRVGHGWTGEVLGYSSKFGWESGLSISEEKKPYVAE HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE INGKRELFNTAPILTSLDFSNPDVADKMVEIIKDYAKKRPDVNYLHIWLSDARNNICECE CCCCHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCHH NCRQELVSDQYIRILNQLDRALTSEGLDTKICFLLYHELLWAPQKEKLDNPERFTMMFAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCHHEEEEEEC ITRTFEMSYADVDFDNSIPTPKPYMRNKIILPNSLEENLSYLFEWQKAFKGDSFVYDYPL HHHHHCCCEECCCCCCCCCCCCHHHCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCC GRAHYGDLGYMKISQTIYRDVSYLSNLHLNGYISCQELRAGFPHNFPNYVMGQMLWKKTR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHC SYEELIEEYFSALYGENWQSVVEYLEKLSIYSSCDYFNAIGSRQNDVLANHYYIAYNLAD CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEECEEEEEEECCC NFLPIIEENISKLLNSQKDEWKQLSYHREYVVKMAKALYLQATGKTRQAQDEWRNVLNYI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH RGHELLFQSNLDVYRVIEVAKNYAGFHL CCCCEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA