| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515798
Identifier: 116515798
GI number: 116515798
Start: 1126063
End: 1127016
Strand: Reverse
Name: 116515798
Synonym: SPD_1097
Alternate gene names: NA
Gene position: 1127016-1126063 (Counterclockwise)
Preceding gene: 116516398
Following gene: 116516486
Centisome position: 55.08
GC content: 39.1
Gene sequence:
>954_bases ATGAAGAACAAAAGAATATTTAAAGACTTCCAAGCTTCAAAAATGAGTTTAAACATTTACACAAGCCCCTTGTTAGCCTT TGTTTTTGTCTTCATAGGAGAGTTTGTGGCTTTTACTTTGTATGGTATTGGCTTGTTAGCTCTCATCGGACTTGCTAGAA ATTTTGGAGAGGCTGGTCAAAATCTTGCAACCTACTTGCAGACCTTGCATCAGAGCTTGACGGATAAAACAAGTGACTTT CGTTTAATTTTAGGATTACTGGCCTTTGGTTTTATTCTTAACACTGTGTTCAGATGGACAAGAAAAGTTGAGAAAAGACC TATTCGAACCTTGGGATTTTATAGAGAGAATTTCCTCAGCAATCTTCTGAAAGGATTTAGTCTAGGCTTGGCACTTTTTC TTCTGACCTTGTTAGGTTTAGTGGTCTTAGGTCAATATCGTTTGGAATCCATTCACTTGAATCCTTATTCTCTTGCCTTT GTCGTCTTTACTATCCCATTTTGGATTTTACAGGGGACAGCAGAAGAAGTGGTGGCCCGTGCTTGGCTACTTCCTCAATT GGCCTCAAGAACCAATCTAAAACTAGCTATTCTTATATCTAGCCTGTTCTTTACCCTGCTTCATATGGGCAATTCTGGCC TCACCCCTCTATCTCTAGTAAATCTCTTTTTATTCGGAGTTGCCATGGCTCTTTATCTTCTCAAAACTGATACAGTTTGG GGTGTTGCAGGTATTCATGGTGCTTGGAATTTTGCTCAGGGTAATCTCTTTGGGATTTTAGTTAGTGGTCAACCGTCAGG AACGTCTCTGATGACCTTTTTACCACAAGGCAATCAAGATTGGCTATCAGGTGGTTCTTTTGGCATAGAAGGTTCCATTA TGACAAGTCTGGTATTACTACTGCTGATTGTCTATCTTGCTAATAAATTAAAGAAAGAAAATGAAAGGATGTGA
Upstream 100 bases:
>100_bases CGTGTCAGAAAATATAACATTGATTTTTCCTTTTCTTTCTTGAATTGCTATTAAAAAGTGCTATAATAATAGTATATATA GAAGAAAAGAGGACGGGGAT
Downstream 100 bases:
>100_bases CTTCGGTCCGTCCTTTTCTTCGTGAAAATACTATAAGTATGCTAAAATAGGAATAGCACATGGAGAGAGGATTCTTATGA TCAATCACATTACAGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Abortive Infection Protein; Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease; Caax Amino Protease Family; Ypothetical Protein SMU.; Membrane-Associated CAAX Amino Terminal Protease
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKNKRIFKDFQASKMSLNIYTSPLLAFVFVFIGEFVAFTLYGIGLLALIGLARNFGEAGQNLATYLQTLHQSLTDKTSDF RLILGLLAFGFILNTVFRWTRKVEKRPIRTLGFYRENFLSNLLKGFSLGLALFLLTLLGLVVLGQYRLESIHLNPYSLAF VVFTIPFWILQGTAEEVVARAWLLPQLASRTNLKLAILISSLFFTLLHMGNSGLTPLSLVNLFLFGVAMALYLLKTDTVW GVAGIHGAWNFAQGNLFGILVSGQPSGTSLMTFLPQGNQDWLSGGSFGIEGSIMTSLVLLLLIVYLANKLKKENERM
Sequences:
>Translated_317_residues MKNKRIFKDFQASKMSLNIYTSPLLAFVFVFIGEFVAFTLYGIGLLALIGLARNFGEAGQNLATYLQTLHQSLTDKTSDF RLILGLLAFGFILNTVFRWTRKVEKRPIRTLGFYRENFLSNLLKGFSLGLALFLLTLLGLVVLGQYRLESIHLNPYSLAF VVFTIPFWILQGTAEEVVARAWLLPQLASRTNLKLAILISSLFFTLLHMGNSGLTPLSLVNLFLFGVAMALYLLKTDTVW GVAGIHGAWNFAQGNLFGILVSGQPSGTSLMTFLPQGNQDWLSGGSFGIEGSIMTSLVLLLLIVYLANKLKKENERM >Mature_317_residues MKNKRIFKDFQASKMSLNIYTSPLLAFVFVFIGEFVAFTLYGIGLLALIGLARNFGEAGQNLATYLQTLHQSLTDKTSDF RLILGLLAFGFILNTVFRWTRKVEKRPIRTLGFYRENFLSNLLKGFSLGLALFLLTLLGLVVLGQYRLESIHLNPYSLAF VVFTIPFWILQGTAEEVVARAWLLPQLASRTNLKLAILISSLFFTLLHMGNSGLTPLSLVNLFLFGVAMALYLLKTDTVW GVAGIHGAWNFAQGNLFGILVSGQPSGTSLMTFLPQGNQDWLSGGSFGIEGSIMTSLVLLLLIVYLANKLKKENERM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35249; Mature: 35249
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKRIFKDFQASKMSLNIYTSPLLAFVFVFIGEFVAFTLYGIGLLALIGLARNFGEAGQ CCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLATYLQTLHQSLTDKTSDFRLILGLLAFGFILNTVFRWTRKVEKRPIRTLGFYRENFLS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NLLKGFSLGLALFLLTLLGLVVLGQYRLESIHLNPYSLAFVVFTIPFWILQGTAEEVVAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCHHHHHHH AWLLPQLASRTNLKLAILISSLFFTLLHMGNSGLTPLSLVNLFLFGVAMALYLLKTDTVW HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH GVAGIHGAWNFAQGNLFGILVSGQPSGTSLMTFLPQGNQDWLSGGSFGIEGSIMTSLVLL HHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHH LLIVYLANKLKKENERM HHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNKRIFKDFQASKMSLNIYTSPLLAFVFVFIGEFVAFTLYGIGLLALIGLARNFGEAGQ CCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLATYLQTLHQSLTDKTSDFRLILGLLAFGFILNTVFRWTRKVEKRPIRTLGFYRENFLS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NLLKGFSLGLALFLLTLLGLVVLGQYRLESIHLNPYSLAFVVFTIPFWILQGTAEEVVAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCHHHHHHH AWLLPQLASRTNLKLAILISSLFFTLLHMGNSGLTPLSLVNLFLFGVAMALYLLKTDTVW HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH GVAGIHGAWNFAQGNLFGILVSGQPSGTSLMTFLPQGNQDWLSGGSFGIEGSIMTSLVLL HHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHH LLIVYLANKLKKENERM HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA