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The map label for this gene is ybaN [H]

Identifier: 116515673

GI number: 116515673

Start: 1148773

End: 1149132

Strand: Reverse

Name: ybaN [H]

Synonym: SPD_1119

Alternate gene names: 116515673

Gene position: 1149132-1148773 (Counterclockwise)

Preceding gene: 116516615

Following gene: 116516861

Centisome position: 56.16

GC content: 39.17

Gene sequence:

>360_bases
ATGCGTCTTATCTATCTGATAATTGGTTTTTTATCACTGGCCTTGGCTATTGTTGGGGTTGTTTTACCCTTGTTGCCGAC
AACGCCTTTCCTTTTGTTGTCTATTGCTTGTTTCTCCAGAAGTTCCAAGCGTTTCGAAGACTGGCTTTATCATACCAAGC
TCTATCAAACATATGTAGCTGATTTTCGCGAGACCAAGTCTATTACGCGTGAACGAAAGAAAAAAATCATCGTCTCTATC
TACGTCTTGATGGGAATTTCTATTTATTTTGCACCTCTTTTACCAGTCAAAATCGGTCTGGGTGCTTTGACCATCTTTAT
CACTTATTATCTCTTCAAGGTCATTCCAGACAAAGAATAG

Upstream 100 bases:

>100_bases
GGGGCCCGAAAGTAAATTTCAGGCTCCTTTTGGTTAGAACTTGACAAAATACATCATTTTATGCGAAACTAGAAGAAGAT
TATTTTAACTAGGAGAAGTT

Downstream 100 bases:

>100_bases
TTAAAACAGTAGTTATTTGCCTTGATAAAATTGAAAGCATATTCATAACAATATGATATAATAAATTTGAAGTAATATTC
AAGGAGAATCAAATGATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MRLIYLIIGFLSLALAIVGVVLPLLPTTPFLLLSIACFSRSSKRFEDWLYHTKLYQTYVADFRETKSITRERKKKIIVSI
YVLMGISIYFAPLLPVKIGLGALTIFITYYLFKVIPDKE

Sequences:

>Translated_119_residues
MRLIYLIIGFLSLALAIVGVVLPLLPTTPFLLLSIACFSRSSKRFEDWLYHTKLYQTYVADFRETKSITRERKKKIIVSI
YVLMGISIYFAPLLPVKIGLGALTIFITYYLFKVIPDKE
>Mature_119_residues
MRLIYLIIGFLSLALAIVGVVLPLLPTTPFLLLSIACFSRSSKRFEDWLYHTKLYQTYVADFRETKSITRERKKKIIVSI
YVLMGISIYFAPLLPVKIGLGALTIFITYYLFKVIPDKE

Specific function: Unknown

COG id: COG2832

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786674, Length=120, Percent_Identity=36.6666666666667, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007401 [H]

Pfam domain/function: PF04304 DUF454 [H]

EC number: NA

Molecular weight: Translated: 13711; Mature: 13711

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIYLIIGFLSLALAIVGVVLPLLPTTPFLLLSIACFSRSSKRFEDWLYHTKLYQTYVA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DFRETKSITRERKKKIIVSIYVLMGISIYFAPLLPVKIGLGALTIFITYYLFKVIPDKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLIYLIIGFLSLALAIVGVVLPLLPTTPFLLLSIACFSRSSKRFEDWLYHTKLYQTYVA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DFRETKSITRERKKKIIVSIYVLMGISIYFAPLLPVKIGLGALTIFITYYLFKVIPDKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]