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The map label for this gene is sorA [H]

Identifier: 116515606

GI number: 116515606

Start: 68133

End: 69038

Strand: Direct

Name: sorA [H]

Synonym: SPD_0067

Alternate gene names: 116515606

Gene position: 68133-69038 (Clockwise)

Preceding gene: 116516149

Following gene: 116515325

Centisome position: 3.33

GC content: 44.37

Gene sequence:

>906_bases
ATGATACAATGGTGGCAAATTTTACTTCTCACTTTGTACTCAGCTTATCAAATCTGTGATGAGTTGACGATCGTTTCATC
TGCAGGTTCCCCTGTATTTGCTGGTTTCATTACTGGTTTAATCATGGGAGATGTGACTACTGGTTTACTTATCGGTGGTA
ACTTGCAACTGTTCGTTCTTGGGGTTGGTACCTTCGGTGGTGCTTCTCGTATCGACGCAACTTCTGGTGCGGTTCTTGCG
ACAGCCTTCTCTGTTTCACAAGGAATTGATGCACCGCTTGCCATTACTACAATCGCTGTACCAGTAGCAGCTCTCTTGAC
TTACTTCGACGTTCTTGGTCGTATGACTACTACCTTCTTCGCTCACCGTGTGGATGCTGCAATCGAACGCTTTGACTATA
AAGGTATTGAACGCAACTACTTGCTTGGTGCGATTCCGTGGGCTCTATCTCGTGCCCTTCCAGTCTTCTTTGCCCTTGCT
TTTGGTGGTGCCTTTGTACAATCAGTAGTAGACTTCGTTGAAGCCTACAAATGGGTTGCAGATGGCTTGACACTCGCAGG
ACGTATGCTTCCAGGTCTTGGATTTGCAATCTTGCTTCGTTACCTTCCAGTTAAACGTAACCTTCACTACCTTGCTATGG
GATTTGGTTTGACAGCTATGTTGACTGTTCTTTACTCATATGTAACAGGTCTTGGTGGCGCTGTTGCTGGTATCGTAGGT
ACTCTTCCTGCTGAAGTTGCTCAAAAAATTGGTTTCGTGAACAACTTCAAAGGTTTGTCTATGATTGGTATTTCTATCGT
AGGTATTTTCCTTGCAGTGCTTCACTTCAAAAATAGCCAAAAAGTAGCTGTAGCAGCACCTTCTACACCATCAGAAAGTG
GGGAAATCGAAGATGACGAATTCTAA

Upstream 100 bases:

>100_bases
AAAAGGTGTTAAACTTACTGCTCAGATGGTTCCAAATGATCCAATTTCAGACTTTTTGAGCTTATTAAAATAGGAAAAAA
ATTTTTAGGAGGTCATTGTT

Downstream 100 bases:

>100_bases
TTACAAACTTACAAAAGAAGATTTTAATCAAATCAACAAACGTAGCTTGTTTACTTTCCAATTAGGTTGGAACTACGAAC
GTATGCAAGCTTCTGGTTAC

Product: PTS system, IIC component

Products: NA

Alternate protein names: EIIC-Sor; PTS system sorbose-specific EIIC component [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVLGVGTFGGASRIDATSGAVLA
TAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFFAHRVDAAIERFDYKGIERNYLLGAIPWALSRALPVFFALA
FGGAFVQSVVDFVEAYKWVADGLTLAGRMLPGLGFAILLRYLPVKRNLHYLAMGFGLTAMLTVLYSYVTGLGGAVAGIVG
TLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDEF

Sequences:

>Translated_301_residues
MIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVLGVGTFGGASRIDATSGAVLA
TAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFFAHRVDAAIERFDYKGIERNYLLGAIPWALSRALPVFFALA
FGGAFVQSVVDFVEAYKWVADGLTLAGRMLPGLGFAILLRYLPVKRNLHYLAMGFGLTAMLTVLYSYVTGLGGAVAGIVG
TLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDEF
>Mature_301_residues
MIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVLGVGTFGGASRIDATSGAVLA
TAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFFAHRVDAAIERFDYKGIERNYLLGAIPWALSRALPVFFALA
FGGAFVQSVVDFVEAYKWVADGLTLAGRMLPGLGFAILLRYLPVKRNLHYLAMGFGLTAMLTVLYSYVTGLGGAVAGIVG
TLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDEF

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=268, Percent_Identity=25, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 31897; Mature: 31897

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVL
CCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEE
GVGTFGGASRIDATSGAVLATAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFF
EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHRVDAAIERFDYKGIERNYLLGAIPWALSRALPVFFALAFGGAFVQSVVDFVEAYKWVA
HHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLTLAGRMLPGLGFAILLRYLPVKRNLHYLAMGFGLTAMLTVLYSYVTGLGGAVAGIVG
HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure
MIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVL
CCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEE
GVGTFGGASRIDATSGAVLATAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFF
EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHRVDAAIERFDYKGIERNYLLGAIPWALSRALPVFFALAFGGAFVQSVVDFVEAYKWVA
HHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLTLAGRMLPGLGFAILLRYLPVKRNLHYLAMGFGLTAMLTVLYSYVTGLGGAVAGIVG
HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]