Click here to switch to the map view.

The map label for this gene is ssb [H]

Identifier: 116515274

GI number: 116515274

Start: 380672

End: 381217

Strand: Reverse

Name: ssb [H]

Synonym: BCc_357

Alternate gene names: 116515274

Gene position: 381217-380672 (Counterclockwise)

Preceding gene: 116515281

Following gene: 116515272

Centisome position: 91.56

GC content: 28.21

Gene sequence:

>546_bases
ATGGCAAGTAGAGGTGTAAATAAAGTTATTTTAATTGGTTATTTAGGGCAGGATCCTGATATACGGTATATGCCTAATGG
TGGTACTGTAGTTAATATTACTTTAGCTACGTCAGATACATGGAAAGATAAACATACGGGTGAAAATAAAGAAAAAACCG
AATGGCATCGAGTTGTTTTATTTGGTAAAATTGCTGAAATTTCCGGTCAATATTTAAAAAAAGGCTCACAAGTTTATATA
GAAGGATCATTACAAACACGTAAATGGAAAGATCAAAATGGATTAGATCGTTATACTACGGAGATAGTGGTTAGTGTTAC
TGGTTCTATGCAAATGTTAGGATCTCGTAATACTAATAATTCTTTTAAATCTTCAGTTAAAAATTCTCAAGATGATTTTT
TAAATGATAAAAATACATCTAGAAGTATACATAAAAAAAAATTGTCTGATGATAATTTATTAAAAAATGAATATCAACAA
CAAAAATCTCATTTAGTAGATTCTACATCTAAAATTGATTTTGATGATGAAGATATTCCTTTTTGA

Upstream 100 bases:

>100_bases
TTAATTAAATTAGAATATTAAAAGTTATTTAATAATTTAATTTTATGATATAATTTTTATTAATTATATTTTTTATATTA
ATAAAATTTGGATTAAAAGT

Downstream 100 bases:

>100_bases
TATTGCAGTAAATAATTTTTTTTAATTACTATATTTTGGTATATTATTTTATAATTTTTTGATAAATTTATTAATTATTT
TGCAAAAAATCTTAGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MASRGVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTEWHRVVLFGKIAEISGQYLKKGSQVYI
EGSLQTRKWKDQNGLDRYTTEIVVSVTGSMQMLGSRNTNNSFKSSVKNSQDDFLNDKNTSRSIHKKKLSDDNLLKNEYQQ
QKSHLVDSTSKIDFDDEDIPF

Sequences:

>Translated_181_residues
MASRGVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTEWHRVVLFGKIAEISGQYLKKGSQVYI
EGSLQTRKWKDQNGLDRYTTEIVVSVTGSMQMLGSRNTNNSFKSSVKNSQDDFLNDKNTSRSIHKKKLSDDNLLKNEYQQ
QKSHLVDSTSKIDFDDEDIPF
>Mature_180_residues
ASRGVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTEWHRVVLFGKIAEISGQYLKKGSQVYIE
GSLQTRKWKDQNGLDRYTTEIVVSVTGSMQMLGSRNTNNSFKSSVKNSQDDFLNDKNTSRSIHKKKLSDDNLLKNEYQQQ
KSHLVDSTSKIDFDDEDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=33.0275229357798, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790494, Length=181, Percent_Identity=54.6961325966851, Blast_Score=204, Evalue=3e-54,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20566; Mature: 20435

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTEWHRVVL
CCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHHEEEEEE
FGKIAEISGQYLKKGSQVYIEGSLQTRKWKDQNGLDRYTTEIVVSVTGSMQMLGSRNTNN
EEHHHHHCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEEECCCEEECCCCCCCH
SFKSSVKNSQDDFLNDKNTSRSIHKKKLSDDNLLKNEYQQQKSHLVDSTSKIDFDDEDIP
HHHHHHCCCCHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure 
ASRGVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTEWHRVVL
CCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCHHEEEEEE
FGKIAEISGQYLKKGSQVYIEGSLQTRKWKDQNGLDRYTTEIVVSVTGSMQMLGSRNTNN
EEHHHHHCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEEECCCEEECCCCCCCH
SFKSSVKNSQDDFLNDKNTSRSIHKKKLSDDNLLKNEYQQQKSHLVDSTSKIDFDDEDIP
HHHHHHCCCCHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]