Definition Buchnera aphidicola str. Cc (Cinara cedri), complete genome.
Accession NC_008513
Length 416,380

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The map label for this gene is aroK [H]

Identifier: 116515271

GI number: 116515271

Start: 378261

End: 378800

Strand: Reverse

Name: aroK [H]

Synonym: BCc_353

Alternate gene names: 116515271

Gene position: 378800-378261 (Counterclockwise)

Preceding gene: 116515272

Following gene: 116515270

Centisome position: 90.97

GC content: 21.3

Gene sequence:

>540_bases
ATGTATATAAAAAAAAAAAAAAATATTTTTTTAGTAGGGCCAATGGGTGCAGGAAAAAGTACTATTGGACGTTTTTTAGC
TAAACAATTAAACATGAAATTTTATGATTCTGATATCGAAATTGAGAGAAAAGCTGGGGCAAATATAGATTGGATTTTTG
ATGTTGAAGGCGAATCAAAATTTCGTATTAGAGAAGAAAAGATGATTAATAAATTAACTAATAAATTTGGTGTAGTATTA
GCTACTGGTGGAGGATCTATTTTATCATTAAAATCAAGAAATTTTTTAATTAATAGAGGTTTTGTAATTTATTTACGTAC
TTCTATTGATGAACAATTAATTAGAACGAATATAGATAAAAATAGACCATTATTATCAAATAATATTAATAAAAATAAAA
AATTATTAAGTCAATTATTTAAAATTCGAGATCCATTATATAGAAGTATATCTAATTTTATAGTAGATACTAGTAATAAA
AAAGTAAAATTTATTCTATCCAAAATTTTAAGTTATATTTCAAATTTAAATTTTATTTAA

Upstream 100 bases:

>100_bases
AATATTTAATATATTTGATATTATTAATATTTTTAAAAATATTTTTTACATAAAAATATTATAAAATATATCATTATTTT
TTTGTTCTAGGAATATTTAT

Downstream 100 bases:

>100_bases
AAAAAATACTAATATTAAAAATATTAAATTTCTTAAATTATATTAAAACTGAGTTTATTATGATAGAAACAATACATGTT
AATTTAAATAATTATAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: SK [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYIKKKKNIFLVGPMGAGKSTIGRFLAKQLNMKFYDSDIEIERKAGANIDWIFDVEGESKFRIREEKMINKLTNKFGVVL
ATGGGSILSLKSRNFLINRGFVIYLRTSIDEQLIRTNIDKNRPLLSNNINKNKKLLSQLFKIRDPLYRSISNFIVDTSNK
KVKFILSKILSYISNLNFI

Sequences:

>Translated_179_residues
MYIKKKKNIFLVGPMGAGKSTIGRFLAKQLNMKFYDSDIEIERKAGANIDWIFDVEGESKFRIREEKMINKLTNKFGVVL
ATGGGSILSLKSRNFLINRGFVIYLRTSIDEQLIRTNIDKNRPLLSNNINKNKKLLSQLFKIRDPLYRSISNFIVDTSNK
KVKFILSKILSYISNLNFI
>Mature_179_residues
MYIKKKKNIFLVGPMGAGKSTIGRFLAKQLNMKFYDSDIEIERKAGANIDWIFDVEGESKFRIREEKMINKLTNKFGVVL
ATGGGSILSLKSRNFLINRGFVIYLRTSIDEQLIRTNIDKNRPLLSNNINKNKKLLSQLFKIRDPLYRSISNFIVDTSNK
KVKFILSKILSYISNLNFI

Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]

COG id: COG0703

COG function: function code E; Shikimate kinase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the shikimate kinase family [H]

Homologues:

Organism=Escherichia coli, GI87082255, Length=173, Percent_Identity=52.6011560693642, Blast_Score=194, Evalue=3e-51,
Organism=Escherichia coli, GI1786587, Length=172, Percent_Identity=30.8139534883721, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320332, Length=156, Percent_Identity=29.4871794871795, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000623
- InterPro:   IPR023000 [H]

Pfam domain/function: PF01202 SKI [H]

EC number: =2.7.1.71 [H]

Molecular weight: Translated: 20632; Mature: 20632

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS01128 SHIKIMATE_KINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIKKKKNIFLVGPMGAGKSTIGRFLAKQLNMKFYDSDIEIERKAGANIDWIFDVEGESK
CCEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCEEECCCCCCEEEEEEECCCCC
FRIREEKMINKLTNKFGVVLATGGGSILSLKSRNFLINRGFVIYLRTSIDEQLIRTNIDK
EEEHHHHHHHHHHHHCEEEEEECCCCEEEEECCCEEEECCEEEEEECCHHHHHHHHCCCC
NRPLLSNNINKNKKLLSQLFKIRDPLYRSISNFIVDTSNKKVKFILSKILSYISNLNFI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYIKKKKNIFLVGPMGAGKSTIGRFLAKQLNMKFYDSDIEIERKAGANIDWIFDVEGESK
CCEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCEEECCCCCCEEEEEEECCCCC
FRIREEKMINKLTNKFGVVLATGGGSILSLKSRNFLINRGFVIYLRTSIDEQLIRTNIDK
EEEHHHHHHHHHHHHCEEEEEECCCCEEEEECCCEEEECCEEEEEECCHHHHHHHHCCCC
NRPLLSNNINKNKKLLSQLFKIRDPLYRSISNFIVDTSNKKVKFILSKILSYISNLNFI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA