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The map label for this gene is cyoA [H]

Identifier: 116515215

GI number: 116515215

Start: 329851

End: 330729

Strand: Reverse

Name: cyoA [H]

Synonym: BCc_291

Alternate gene names: 116515215

Gene position: 330729-329851 (Counterclockwise)

Preceding gene: 116515227

Following gene: 116515214

Centisome position: 79.43

GC content: 17.52

Gene sequence:

>879_bases
ATGAAAAAATTTAGTAAATATAATATTTTTAAATTATTAATGATTTTTTTTGTTTCTATAATATTTTTTTTTATGATATA
TATGAGTAAAAAAATATGTGTAAATGTTTCAGGTTATATTTCAAAATTAGAATTTGAATTAATGCTATTAGTTTTTAAAA
TTATGTTTATTATTGTTTTTCCTGTTTTAATGTTAGTTTTTTTTATTGTCTATTATTATAGACATTCAAATACATCTGAA
AAATATACTCCAAATTGGAAACATTCATATTTTTTAGAAATTATATGTTGGTTAATTCCAATTTTTATAATTTCTTTTTT
AGCATTTTTATCATGGAATACTACACATAGTTTAGAACCTAGTAAAAAATTAAAAGTAAATATTAATAAACCTATTACAA
TTGAAGTAGTTTCTTTAAATTGGCGTTGGTTATTTATTTATCCTTATTATAAAATTGCAACAATTAATGAAATATCTTTT
CCTAAAAATGTTCCAGTGAATTTTAAGATTACTTCTAATTCTGTTATGAATTCTTTTTTTATTCCTAATTTAGGTAGTCA
AATATATACTATGGCTGGAATGAAAACAGAATTAAATTTAATAGCTTTAAGTAACGGAATTTATAAAGGTATTTCTTCAA
ATTATAGTGGTAATGGTTTTTCTAATATGAAATTTAAAGTTTATGTTCAAAATGATTTATTTCATTTTAATAAATGGATT
AAAAAAGTTAAATCAAAAAAAAAGTTTTTATCTTTTAAAAAACAATTTTTAAATTTATCAAAAAATAGTAAAAAATATAA
AAATGAATATTTTTCATATACTGATCCATTATTGTTTTATAAAATAATTAAAATATTTAATTCTTGTCATAATACATAA

Upstream 100 bases:

>100_bases
TATTACAAATAATTATTTTATATAAAAAATGTTTTTTATATTTTAAAGTATTTTTTATTAAGAAAAAACAAATATATTAT
GTTATATAGGTTTAAAAACT

Downstream 100 bases:

>100_bases
TTAAATGTTTTTTCTAAAAATAATATTTATACTTTTTTATTATAAGGATTGTTTCTAATGTTTGGAAAATTAACAATTAA
TTCAATACCATATCATGAAC

Product: CyoA

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Ubiquinol oxidase chain B; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKKFSKYNIFKLLMIFFVSIIFFFMIYMSKKICVNVSGYISKLEFELMLLVFKIMFIIVFPVLMLVFFIVYYYRHSNTSE
KYTPNWKHSYFLEIICWLIPIFIISFLAFLSWNTTHSLEPSKKLKVNINKPITIEVVSLNWRWLFIYPYYKIATINEISF
PKNVPVNFKITSNSVMNSFFIPNLGSQIYTMAGMKTELNLIALSNGIYKGISSNYSGNGFSNMKFKVYVQNDLFHFNKWI
KKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSYTDPLLFYKIIKIFNSCHNT

Sequences:

>Translated_292_residues
MKKFSKYNIFKLLMIFFVSIIFFFMIYMSKKICVNVSGYISKLEFELMLLVFKIMFIIVFPVLMLVFFIVYYYRHSNTSE
KYTPNWKHSYFLEIICWLIPIFIISFLAFLSWNTTHSLEPSKKLKVNINKPITIEVVSLNWRWLFIYPYYKIATINEISF
PKNVPVNFKITSNSVMNSFFIPNLGSQIYTMAGMKTELNLIALSNGIYKGISSNYSGNGFSNMKFKVYVQNDLFHFNKWI
KKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSYTDPLLFYKIIKIFNSCHNT
>Mature_292_residues
MKKFSKYNIFKLLMIFFVSIIFFFMIYMSKKICVNVSGYISKLEFELMLLVFKIMFIIVFPVLMLVFFIVYYYRHSNTSE
KYTPNWKHSYFLEIICWLIPIFIISFLAFLSWNTTHSLEPSKKLKVNINKPITIEVVSLNWRWLFIYPYYKIATINEISF
PKNVPVNFKITSNSVMNSFFIPNLGSQIYTMAGMKTELNLIALSNGIYKGISSNYSGNGFSNMKFKVYVQNDLFHFNKWI
KKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSYTDPLLFYKIIKIFNSCHNT

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=253, Percent_Identity=50.5928853754941, Blast_Score=264, Evalue=6e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 34821; Mature: 34821

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFSKYNIFKLLMIFFVSIIFFFMIYMSKKICVNVSGYISKLEFELMLLVFKIMFIIVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHH
PVLMLVFFIVYYYRHSNTSEKYTPNWKHSYFLEIICWLIPIFIISFLAFLSWNTTHSLEP
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SKKLKVNINKPITIEVVSLNWRWLFIYPYYKIATINEISFPKNVPVNFKITSNSVMNSFF
CCCEEEECCCCEEEEEEEECEEEEEEEECEEEEEEECCCCCCCCCEEEEECCCHHHHHHC
IPNLGSQIYTMAGMKTELNLIALSNGIYKGISSNYSGNGFSNMKFKVYVQNDLFHFNKWI
CCCCCCHHHHHCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
KKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSYTDPLLFYKIIKIFNSCHNT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFSKYNIFKLLMIFFVSIIFFFMIYMSKKICVNVSGYISKLEFELMLLVFKIMFIIVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHH
PVLMLVFFIVYYYRHSNTSEKYTPNWKHSYFLEIICWLIPIFIISFLAFLSWNTTHSLEP
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SKKLKVNINKPITIEVVSLNWRWLFIYPYYKIATINEISFPKNVPVNFKITSNSVMNSFF
CCCEEEECCCCEEEEEEEECEEEEEEEECEEEEEEECCCCCCCCCEEEEECCCHHHHHHC
IPNLGSQIYTMAGMKTELNLIALSNGIYKGISSNYSGNGFSNMKFKVYVQNDLFHFNKWI
CCCCCCHHHHHCCCCEEEEEEEECCCHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
KKVKSKKKFLSFKKQFLNLSKNSKKYKNEYFSYTDPLLFYKIIKIFNSCHNT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]