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The map label for this gene is cyoC [H]

Identifier: 116515213

GI number: 116515213

Start: 327188

End: 327772

Strand: Reverse

Name: cyoC [H]

Synonym: BCc_289

Alternate gene names: 116515213

Gene position: 327772-327188 (Counterclockwise)

Preceding gene: 116515214

Following gene: 116515212

Centisome position: 78.72

GC content: 17.09

Gene sequence:

>585_bases
ATGAATAATAAAAAAGATTATGTTTCATATTCTTCACTAAAAAATAATAGTATTTTAGGTTTTTGGATTTATTTAATGAG
TGATTGTATTATTTTTTCTGTATTATTCATTGTGCATATAATAATGTCACGACATGGATATAATGGTTTTTTAAGAGAAA
ATAAATTATTTTCAAAGTTCGTCCTTTTTTTAGAAACTTTAATTTTATTATTTTGTTCTTTATCTTTTAGTTTAATAAAA
TATTTTTTAAAAAAATCTTATAAGAAATGTATATTATTTTTTTTATTTATAACATTAATTTTAGGATCTACTTTTATAAG
TTTAGAGTTTTTTGAATTCTTGAATATTATTGAAAAAGGATTTTTTCCTAATACAAATGGATATTTTTCTTCTTTTTATG
TTTTATTATGTATACATGGATTACATGTTATTTTTGGATTATTATGGATAATAATATCAATTTTTCAATTTTTTTTTTTA
AAATTCTCTAATTTTTTATACATATCATTGATATGTTGTTGTTTGTTTTGGCATTTTTTAGATATAATTTGGATTATTCT
TATTTTTTGTGTTTATTTTAATTAA

Upstream 100 bases:

>100_bases
TTTCAATAAAAAAAATAAAAGATATTGAAAACAAACATTTATTAAAAAAATAATTTTTAAATTTCATTTATTAAGTAATA
TTTTTATATAAGGAATTAAT

Downstream 100 bases:

>100_bases
AATAATAAATATTATAATTTATTTGGGGTATTAATATATGTTAGTAAAAAAAAAATATACTTTTAAAGATATTATTTTTA
TTTTTTTAAAGAAAAAATTT

Product: CyoC

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNNKKDYVSYSSLKNNSILGFWIYLMSDCIIFSVLFIVHIIMSRHGYNGFLRENKLFSKFVLFLETLILLFCSLSFSLIK
YFLKKSYKKCILFFLFITLILGSTFISLEFFEFLNIIEKGFFPNTNGYFSSFYVLLCIHGLHVIFGLLWIIISIFQFFFL
KFSNFLYISLICCCLFWHFLDIIWIILIFCVYFN

Sequences:

>Translated_194_residues
MNNKKDYVSYSSLKNNSILGFWIYLMSDCIIFSVLFIVHIIMSRHGYNGFLRENKLFSKFVLFLETLILLFCSLSFSLIK
YFLKKSYKKCILFFLFITLILGSTFISLEFFEFLNIIEKGFFPNTNGYFSSFYVLLCIHGLHVIFGLLWIIISIFQFFFL
KFSNFLYISLICCCLFWHFLDIIWIILIFCVYFN
>Mature_194_residues
MNNKKDYVSYSSLKNNSILGFWIYLMSDCIIFSVLFIVHIIMSRHGYNGFLRENKLFSKFVLFLETLILLFCSLSFSLIK
YFLKKSYKKCILFFLFITLILGSTFISLEFFEFLNIIEKGFFPNTNGYFSSFYVLLCIHGLHVIFGLLWIIISIFQFFFL
KFSNFLYISLICCCLFWHFLDIIWIILIFCVYFN

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=184, Percent_Identity=34.2391304347826, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23216; Mature: 23216

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKKDYVSYSSLKNNSILGFWIYLMSDCIIFSVLFIVHIIMSRHGYNGFLRENKLFSKF
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VLFLETLILLFCSLSFSLIKYFLKKSYKKCILFFLFITLILGSTFISLEFFEFLNIIEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FFPNTNGYFSSFYVLLCIHGLHVIFGLLWIIISIFQFFFLKFSNFLYISLICCCLFWHFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIWIILIFCVYFN
HHHHHHHHHHHHCC
>Mature Secondary Structure
MNNKKDYVSYSSLKNNSILGFWIYLMSDCIIFSVLFIVHIIMSRHGYNGFLRENKLFSKF
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VLFLETLILLFCSLSFSLIKYFLKKSYKKCILFFLFITLILGSTFISLEFFEFLNIIEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FFPNTNGYFSSFYVLLCIHGLHVIFGLLWIIISIFQFFFLKFSNFLYISLICCCLFWHFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIWIILIFCVYFN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]