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The map label for this gene is cyoE [H]

Identifier: 116515211

GI number: 116515211

Start: 325934

End: 326854

Strand: Reverse

Name: cyoE [H]

Synonym: BCc_287

Alternate gene names: 116515211

Gene position: 326854-325934 (Counterclockwise)

Preceding gene: 116515212

Following gene: 116515203

Centisome position: 78.5

GC content: 15.85

Gene sequence:

>921_bases
ATGGATTTTCGACAATTTAAATCATTAATATCAATTTTTTTTGTTTTTTTTAAAAATAATAAAATATTTAATATTATTGA
ATTGATAAAACCCGGGATTATTTTAGGAAATATTATTTGTTTATCTGGAGGATTTTTTTTAGCTTTAAATGAAAAGTTAT
CAAAAATTTTTTTTTTAAAAACAGTTTTTGGTTTAATACTTATTATTTCATCATCTTGTATATTAAATAATATTATTGAT
AGAGATATAGATAAAAAAATGAATAGAACTAAAAATAGATTTTTATGTATAAATACTAATGTTTTTTTATTAAAAATATT
ATTTTTTTTTTCTATTATATTATTAATTTTAGGCTTGTTAGTTTTTTATATATATATAAATTTTTTATGTACAATAATTT
CTTTTTTTGGATTTTTTTTTTATGTTTATTTATATTCTTATTTATTTAAAAGAAAAACATATTTTTCAACTTTTGTAGGT
AGTGTTTCTGGATCTTTACCACCTATTATAGGGTATGTTGCTGTTAATAATTGTTTAAATAGATGTTGTACAATTTTGTT
TTTTATGTTTTCTTTTTGGCAAATTGCACATTCTTATTCTATAATAATATATAGATATTCAGATTATAAATTATTAAATC
TTCCAGTATTTCCGATTTTATATGGAAAATTAAAAACAATAATTTTTATTTCAATATGTATTTTGAATTTATTTTTTTTT
AATTTTTTATTATATTTTTTTGGTTATGTAAAGTTTTTTTATTTTTTGTATACTAGTTTTTTTATCTTTCTATGGTTTAT
TTTTTCTTTTTTAAGTAATTCTAGATATTTTACAATTAAAATTTGGTCTCGAATTATGTTTTTCTTTTCTATATTTATTA
TTTTTATGATAAGTTTTTTAATGAGTTTAAATAATTTTTAA

Upstream 100 bases:

>100_bases
AATATTTTTTTGAAATTAATATTTCTCAAAAAAATTTTTTAATTATATTATCATTAATATTTACTATCATTATTATCTGT
ATTATTAGTATAGGATCTTT

Downstream 100 bases:

>100_bases
AAATTTTTTTTAAAAACAATTATTATTAATTGGTAATCCTGATATTTGACTAGCATATTTAATAAATCCTTTTGGAAATA
GGATAAATAAATCTTGACTA

Product: CyoE

Products: NA

Alternate protein names: Heme B farnesyltransferase; Heme O synthase [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDFRQFKSLISIFFVFFKNNKIFNIIELIKPGIILGNIICLSGGFFLALNEKLSKIFFLKTVFGLILIISSSCILNNIID
RDIDKKMNRTKNRFLCINTNVFLLKILFFFSIILLILGLLVFYIYINFLCTIISFFGFFFYVYLYSYLFKRKTYFSTFVG
SVSGSLPPIIGYVAVNNCLNRCCTILFFMFSFWQIAHSYSIIIYRYSDYKLLNLPVFPILYGKLKTIIFISICILNLFFF
NFLLYFFGYVKFFYFLYTSFFIFLWFIFSFLSNSRYFTIKIWSRIMFFFSIFIIFMISFLMSLNNF

Sequences:

>Translated_306_residues
MDFRQFKSLISIFFVFFKNNKIFNIIELIKPGIILGNIICLSGGFFLALNEKLSKIFFLKTVFGLILIISSSCILNNIID
RDIDKKMNRTKNRFLCINTNVFLLKILFFFSIILLILGLLVFYIYINFLCTIISFFGFFFYVYLYSYLFKRKTYFSTFVG
SVSGSLPPIIGYVAVNNCLNRCCTILFFMFSFWQIAHSYSIIIYRYSDYKLLNLPVFPILYGKLKTIIFISICILNLFFF
NFLLYFFGYVKFFYFLYTSFFIFLWFIFSFLSNSRYFTIKIWSRIMFFFSIFIIFMISFLMSLNNF
>Mature_306_residues
MDFRQFKSLISIFFVFFKNNKIFNIIELIKPGIILGNIICLSGGFFLALNEKLSKIFFLKTVFGLILIISSSCILNNIID
RDIDKKMNRTKNRFLCINTNVFLLKILFFFSIILLILGLLVFYIYINFLCTIISFFGFFFYVYLYSYLFKRKTYFSTFVG
SVSGSLPPIIGYVAVNNCLNRCCTILFFMFSFWQIAHSYSIIIYRYSDYKLLNLPVFPILYGKLKTIIFISICILNLFFF
NFLLYFFGYVKFFYFLYTSFFIFLWFIFSFLSNSRYFTIKIWSRIMFFFSIFIIFMISFLMSLNNF

Specific function: Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group [H]

COG id: COG0109

COG function: function code O; Polyprenyltransferase (cytochrome oxidase assembly factor)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786631, Length=279, Percent_Identity=35.4838709677419, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006369
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 36612; Mature: 36612

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00943 UBIA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRQFKSLISIFFVFFKNNKIFNIIELIKPGIILGNIICLSGGFFLALNEKLSKIFFLK
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHH
TVFGLILIISSSCILNNIIDRDIDKKMNRTKNRFLCINTNVFLLKILFFFSIILLILGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
VFYIYINFLCTIISFFGFFFYVYLYSYLFKRKTYFSTFVGSVSGSLPPIIGYVAVNNCLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RCCTILFFMFSFWQIAHSYSIIIYRYSDYKLLNLPVFPILYGKLKTIIFISICILNLFFF
HHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
NFLLYFFGYVKFFYFLYTSFFIFLWFIFSFLSNSRYFTIKIWSRIMFFFSIFIIFMISFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MSLNNF
HHHCCC
>Mature Secondary Structure
MDFRQFKSLISIFFVFFKNNKIFNIIELIKPGIILGNIICLSGGFFLALNEKLSKIFFLK
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHH
TVFGLILIISSSCILNNIIDRDIDKKMNRTKNRFLCINTNVFLLKILFFFSIILLILGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
VFYIYINFLCTIISFFGFFFYVYLYSYLFKRKTYFSTFVGSVSGSLPPIIGYVAVNNCLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RCCTILFFMFSFWQIAHSYSIIIYRYSDYKLLNLPVFPILYGKLKTIIFISICILNLFFF
HHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
NFLLYFFGYVKFFYFLYTSFFIFLWFIFSFLSNSRYFTIKIWSRIMFFFSIFIIFMISFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MSLNNF
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA