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The map label for this gene is rluD

Identifier: 116515184

GI number: 116515184

Start: 285849

End: 286637

Strand: Direct

Name: rluD

Synonym: BCc_253

Alternate gene names: NA

Gene position: 285849-286637 (Clockwise)

Preceding gene: 116515182

Following gene: 116515185

Centisome position: 68.65

GC content: 22.18

Gene sequence:

>965_bases
ATGTCAAATTTAAAAAAAATTAATTTTATAGTTCCAAAACTAAAAGAGAAAAGTATTAGATTAGATAAAATTTTAGTAAA
ACATTTAAATTCTTTTTCTAGATCTTCTATAAAAAAATGGATTTTATCAGGATTTATAAAAGTAAATAATATTACAGCTA
ATAAACCAAAAAAAAAATTTTATTTAAAGATAGAATATCTCTTATAATAAATAAAAAATCAAATTTTATTAAAATTAAAA
AAGAAAATATATTTTTAAATATAATTTTTGAAGATTCTGAAATATTAATTATAAATAAACCAACTAATTTTGTAGTTCAT
TTAGGTTATGGGAATACATCTGGAACGTTATTAAACGCTTTAATTTTTCATTATCCTGATAATTTATTGATACCTAGAGC
GGGAATAGTTCATAGATTAGATCGTAATACTACAGGAATTTTAGTAGTAGCTAAAACAATTTCTACATATTATTTTTTAA
TTAATTTGTTCAAAAAACGAAAAATTATTAAAGAATATGATGTTATTGTAATCGGAAGAATAGAAGTAGACGGAAAAATA
GAAAAACCAATAAAACGTGATATTTACAATCGTACAAAAATGACCGTAGGTATAGGAGGTAAACAAGCAATTACATATTA
TTCAGTAATAACAATTTTTAAAAATCACACATATCTTCGAATTCAATTAAAAACTGGTAGAATGCATCAGATTAGAGTAC
ATTTATCATCAATTTTTCATCCAGTATTAGGAGATAAAATATATTCTAAAGGTATTAAATCTAATTTTTCTAATTGTTCT
AAAAAAATGAAAAATTTTTTATCTAAATTTAATCGACCAGCTTTACACGCTAGAATGTTAAATTTTATACATCCAAAAAC
GAACAAAAAAAAAAATTGGATTATCTATCCCCCAAAAGATATGTTATCATTAATTAATGTTTTATATTCAGAAGATATGA
ATTAA

Upstream 100 bases:

>100_bases
TTAATATAATTTTTTAAAAATAAGGATTATTATATTAAATTTATTGTTAATAAAAGAATATTATTATAAATTTTAATATA
AAAATTTTAACAAGGTTAAT

Downstream 100 bases:

>100_bases
TTTTAAAAAAAATGTTTTATAAAAAATTTTTATATAATGTTTTTTATTATTTTAATAATATAAATTTATTTAAGTGTATA
TATGTTTAAAAAAAATAAAA

Product: RluD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>321_residues
MSNLKKINFIVPKLKEKSIRLDKILVKHLNSFSRSSIKKWILSGFIKVNNITANKPKKKILFKDRISLIINKKSNFIKIK
KENIFLNIIFEDSEILIINKPTNFVVHLGYGNTSGTLLNALIFHYPDNLLIPRAGIVHRLDRNTTGILVVAKTISTYYFL
INLFKKRKIIKEYDVIVIGRIEVDGKIEKPIKRDIYNRTKMTVGIGGKQAITYYSVITIFKNHTYLRIQLKTGRMHQIRV
HLSSIFHPVLGDKIYSKGIKSNFSNCSKKMKNFLSKFNRPALHARMLNFIHPKTNKKKNWIIYPPKDMLSLINVLYSEDM
N

Sequences:

>Translated_263_residues
LIHIF*I*NIN***HIFWGIDNPIFFFVRFWMYKI*HSSV*SWSIKFR*KIFHFFRTIRKIRFNTFRIYFIS*YWMKN**
*MYSNLMHSTSF*LNSKICVIFKNCYY*IICNCLFTSYTYGHFCTIVNITFYWFFYFSVYFYSSDYNNIIFFNNFSFFEQ
IN*KIICRNCFSYY*NSCSITI*SMNYSRSRYQ*IIRIMKN*SV**RSRCIPIT*MNYKISWFIYN*YFRIFKNYI*KYI
FFFNFNKI*FFIYYKRYSIFK*N
>Mature_263_residues
LIHIF*I*NIN***HIFWGIDNPIFFFVRFWMYKI*HSSV*SWSIKFR*KIFHFFRTIRKIRFNTFRIYFIS*YWMKN**
*MYSNLMHSTSF*LNSKICVIFKNCYY*IICNCLFTSYTYGHFCTIVNITFYWFFYFSVYFYSSDYNNIIFFNNFSFFEQ
IN*KIICRNCFSYY*NSCSITI*SMNYSRSRYQ*IIRIMKN*SV**RSRCIPIT*MNYKISWFIYN*YFRIFKNYI*KYI
FFFNFNKI*FFIYYKRYSIFK*N

Specific function: Unknown

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29468; Mature: 29468

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LIHIFININHIFWGIDNPIFFFVRFWMYKIHSSVSWSIKFRKIFHFFRTIRKIRFNTFRI
CEEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHEEE
YFISYWMKNMYSNLMHSTSFLNSKICVIFKNCYYIICNCLFTSYTYGHFCTIVNITFYWF
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FYFSVYFYSSDYNNIIFFNNFSFFEQINKIICRNCFSYYNSCSITISMNYSRSRYQIIRI
HHHHHEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHH
MKNSVRSRCIPITMNYKISWFIYNYFRIFKNYIKYIFFFNFNKIFFIYYKRYSIFKN
HHHHHHCCEEEEEECCEEEEEHHHHHHHHHHHHHEEEEEECCEEEEEEEEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA