Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is pheA [H]
Identifier: 116515176
GI number: 116515176
Start: 278769
End: 279923
Strand: Direct
Name: pheA [H]
Synonym: BCc_244
Alternate gene names: 116515176
Gene position: 278769-279923 (Clockwise)
Preceding gene: 116515173
Following gene: 116515177
Centisome position: 66.95
GC content: 15.84
Gene sequence:
>1155_bases ATGAAAAAAAAAACTCTTAATTATTTAAGAAGTCAAATAAATTATATTAATTATAAAATAATTAAACTATTATCACAACG AGAATTAATATCAATTGATATTCTTAAAAATAAAATATGTAATAATTTTAAAATTCAAGATAAAAAACGTGAAGTACAAT TATTCCAAAAAATAGAAAAAATTAGTAAGAAAAAAAAAATAAATTTAGTATTTATAAAAAAAATTTTTAAATTAATTATA AAAAATTCTATATATATTCAAAAGTTTTGGAATAAAGAAATTTTTAAAAAAAAAAAAATATATAATTGTGGATATTTAGG ACCTATCGGTTCATATTCATATATCGCTTTAAATACTCTTATAAGAAAAGAAAAAAAAATTTTTTTAGAAAATGCATACA AAAATTTTGAATCAATTATAACGGATTTAAATAAAGAAATTTGTAAATACGCAATATTACCTATAGAAAATAATATATCA GGAATTATTCCTGAAGTATACGAGATACTAAAAAATCAAGAAGAAATATATATTATTCAAGAAGTATATATAAAAATTAA ACATACTTTGTTAACTATAAAAAATAGTATTTTTTCTGAAATCAAGAATGTATATAGTCATCAACAACCATTTAAACAAT GTAGTAATTTTCTTAAAAACTTTCCAAAATGGAAAAAACATTGTTTTAATAGTACTTCTGCTGCTATGACTCATTTATTA AAAGAAAATAAAAAAGATACGGCTGTAATTGGAAATATTGTCGGTGGTTCATATTATAATTTAAAAAAAATTGCAACAAA TATTAGTAATAAAAAAAAAAACATAACTAGATTTATTCTAATATCTAAAAAACCTAGAAAATTATTAAATTTTGTTTCTA AAAAAATAACTATGTTATTAACAATTATTAAAAATAAAAAAAACAAAAAAAAAATATTAAATATTTTTAGAAAAAAAAAA ATAATACTTTTAAAATTAATAAAAAATAAAAATATAAATAAAAAAAAAGAAATAACATATTTTATAGAAATTCAATTAGA TATTGAATCAAAGAAAATACAACATTTATTATTTAAAATTAACAAATATACAAAAAGAACAAAATTTTTAGGTTGTTATC CTATTGAAGAAAAATTAAATAATAGTATAAAATAA
Upstream 100 bases:
>100_bases TTATTTTATTTATTTTATTTAATAAAATTATATTAATTAAATACAAATATTCATATAATATATAAAAATATATAATAAAT ATTTAAAATCGGAGATTAAA
Downstream 100 bases:
>100_bases TTGTAAATTAATATTTATTAAAAAATAAAAAATTTTATATTACAATAATAATTATAACTTGTATAAAGGAACAAAATAAT AATTATGTTTAATAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKKKTLNYLRSQINYINYKIIKLLSQRELISIDILKNKICNNFKIQDKKREVQLFQKIEKISKKKKINLVFIKKIFKLII KNSIYIQKFWNKEIFKKKKIYNCGYLGPIGSYSYIALNTLIRKEKKIFLENAYKNFESIITDLNKEICKYAILPIENNIS GIIPEVYEILKNQEEIYIIQEVYIKIKHTLLTIKNSIFSEIKNVYSHQQPFKQCSNFLKNFPKWKKHCFNSTSAAMTHLL KENKKDTAVIGNIVGGSYYNLKKIATNISNKKKNITRFILISKKPRKLLNFVSKKITMLLTIIKNKKNKKKILNIFRKKK IILLKLIKNKNINKKKEITYFIEIQLDIESKKIQHLLFKINKYTKRTKFLGCYPIEEKLNNSIK
Sequences:
>Translated_384_residues MKKKTLNYLRSQINYINYKIIKLLSQRELISIDILKNKICNNFKIQDKKREVQLFQKIEKISKKKKINLVFIKKIFKLII KNSIYIQKFWNKEIFKKKKIYNCGYLGPIGSYSYIALNTLIRKEKKIFLENAYKNFESIITDLNKEICKYAILPIENNIS GIIPEVYEILKNQEEIYIIQEVYIKIKHTLLTIKNSIFSEIKNVYSHQQPFKQCSNFLKNFPKWKKHCFNSTSAAMTHLL KENKKDTAVIGNIVGGSYYNLKKIATNISNKKKNITRFILISKKPRKLLNFVSKKITMLLTIIKNKKNKKKILNIFRKKK IILLKLIKNKNINKKKEITYFIEIQLDIESKKIQHLLFKINKYTKRTKFLGCYPIEEKLNNSIK >Mature_384_residues MKKKTLNYLRSQINYINYKIIKLLSQRELISIDILKNKICNNFKIQDKKREVQLFQKIEKISKKKKINLVFIKKIFKLII KNSIYIQKFWNKEIFKKKKIYNCGYLGPIGSYSYIALNTLIRKEKKIFLENAYKNFESIITDLNKEICKYAILPIENNIS GIIPEVYEILKNQEEIYIIQEVYIKIKHTLLTIKNSIFSEIKNVYSHQQPFKQCSNFLKNFPKWKKHCFNSTSAAMTHLL KENKKDTAVIGNIVGGSYYNLKKIATNISNKKKNITRFILISKKPRKLLNFVSKKITMLLTIIKNKKNKKKILNIFRKKK IILLKLIKNKNINKKKEITYFIEIQLDIESKKIQHLLFKINKYTKRTKFLGCYPIEEKLNNSIK
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=370, Percent_Identity=29.7297297297297, Blast_Score=215, Evalue=5e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 45723; Mature: 45723
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS00857 PREPHENATE_DEHYDR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKTLNYLRSQINYINYKIIKLLSQRELISIDILKNKICNNFKIQDKKREVQLFQKIEK CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ISKKKKINLVFIKKIFKLIIKNSIYIQKFWNKEIFKKKKIYNCGYLGPIGSYSYIALNTL HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IRKEKKIFLENAYKNFESIITDLNKEICKYAILPIENNISGIIPEVYEILKNQEEIYIIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCCCCEEEHH EVYIKIKHTLLTIKNSIFSEIKNVYSHQQPFKQCSNFLKNFPKWKKHCFNSTSAAMTHLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHH KENKKDTAVIGNIVGGSYYNLKKIATNISNKKKNITRFILISKKPRKLLNFVSKKITMLL HCCCCCHHHEEHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH TIIKNKKNKKKILNIFRKKKIILLKLIKNKNINKKKEITYFIEIQLDIESKKIQHLLFKI HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHH NKYTKRTKFLGCYPIEEKLNNSIK HHHHHHHHEEEEECCHHHCCCCCC >Mature Secondary Structure MKKKTLNYLRSQINYINYKIIKLLSQRELISIDILKNKICNNFKIQDKKREVQLFQKIEK CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ISKKKKINLVFIKKIFKLIIKNSIYIQKFWNKEIFKKKKIYNCGYLGPIGSYSYIALNTL HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IRKEKKIFLENAYKNFESIITDLNKEICKYAILPIENNISGIIPEVYEILKNQEEIYIIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCCCCEEEHH EVYIKIKHTLLTIKNSIFSEIKNVYSHQQPFKQCSNFLKNFPKWKKHCFNSTSAAMTHLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHH KENKKDTAVIGNIVGGSYYNLKKIATNISNKKKNITRFILISKKPRKLLNFVSKKITMLL HCCCCCHHHEEHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH TIIKNKKNKKKILNIFRKKKIILLKLIKNKNINKKKEITYFIEIQLDIESKKIQHLLFKI HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHH NKYTKRTKFLGCYPIEEKLNNSIK HHHHHHHHEEEEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]