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The map label for this gene is yhbZ

Identifier: 116515173

GI number: 116515173

Start: 276665

End: 277681

Strand: Direct

Name: yhbZ

Synonym: BCc_241

Alternate gene names: 116515173

Gene position: 276665-277681 (Clockwise)

Preceding gene: 116515172

Following gene: 116515176

Centisome position: 66.45

GC content: 21.24

Gene sequence:

>1017_bases
ATGAAATTTGTTGATTCTGTTATTATTAATGTATCTGCGGGAAAAGGAGGAGATGGTTGTATTAGTTTTAGAAGAGAAAA
ATTTGTACCTAAAGGAGGTCCAGACGGAGGAAATGGAGGTGATGGAGGAAATATTTGGATAGTTTCAAATACTAATATAA
ATACATTAACAGATTATAGAATTAAAAAAATATTTCAATCTGAAAATGGTAAAAATGGTTTAAATTCAAATCGTTCTGGT
AAAAATGGAAAAGATATTTATATACCAGTTCCGTTAGGAACCAGAATCATAGATAATGACACTAAAAAAATTATTATCGA
AATTTTAAAAATTAATCAAAAATTTTTAGTAGCGAAAGGTGGAAAACGTGGTTTAGGAAATACAAATTTCAAATCTTCTA
TTAATCAAACACCAAGAAAAAAAACTTATGGTACATTAGGTGAAAACAAAAATATATTATTAGAATTAATATTAATAGCA
GATATTGGAACATTAGGTTTACCAAATTCTGGAAAATCTACATTAATAACATCTATGTCTAATGCAAAAACTAAAATAGA
TATTTACCCTTTTACTACATTAATTCCTATATTAGGAACAGTAAAAGCAAAAAAAAAAAAATTTATTATAGCTGACATAC
CAGGAATTATTAAAAATGCTTCGTTAGGTATAGGTTTAGGTATAAAATTTTTAAAACACTTATCTCGTTGTAAATTATTA
CTACATATTATTGATATCACTATAAATAAAAAAAAAATAAACAAAATTAGATATATTATATTAAAAGAATTAAAAAACTT
TAATAAAAAATTATTTCAAAAAACTAGATGGTTAATCTTTAATAAAATTGATTTATTAAAACCTAAAAAAATCTCCCAAA
TAAAAAAATATATAAAAAAAAAAATAGAAAAAAACAAAAAATATTATTTTATTTCAGCAAAAAAAAATATTGGAATAAAA
AAATTATCTAAAGATATAATAAAATATTTATATAAAAAAAATAAAGAATATATTTAA

Upstream 100 bases:

>100_bases
AATTGAATAATTTAAATAAAAAACTTCAAAATCGCCAAATATCTATAAAATATTAATACATATTTCATGATTTAAAACAT
ATTATAAAAGAGAGAAAAAC

Downstream 100 bases:

>100_bases
AGTAATATAAAAATATTCTTTTTATATTTTAAATATTTTTTTTATAAATTTTATTTATATAAAAACCCGGAAATAAAAAC
CGGGTTTTAAAAAATAATTA

Product: Obg family GTP-binding protein

Products: NA

Alternate protein names: GTP-binding protein obg

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKFVDSVIINVSAGKGGDGCISFRREKFVPKGGPDGGNGGDGGNIWIVSNTNINTLTDYRIKKIFQSENGKNGLNSNRSG
KNGKDIYIPVPLGTRIIDNDTKKIIIEILKINQKFLVAKGGKRGLGNTNFKSSINQTPRKKTYGTLGENKNILLELILIA
DIGTLGLPNSGKSTLITSMSNAKTKIDIYPFTTLIPILGTVKAKKKKFIIADIPGIIKNASLGIGLGIKFLKHLSRCKLL
LHIIDITINKKKINKIRYIILKELKNFNKKLFQKTRWLIFNKIDLLKPKKISQIKKYIKKKIEKNKKYYFISAKKNIGIK
KLSKDIIKYLYKKNKEYI

Sequences:

>Translated_338_residues
MKFVDSVIINVSAGKGGDGCISFRREKFVPKGGPDGGNGGDGGNIWIVSNTNINTLTDYRIKKIFQSENGKNGLNSNRSG
KNGKDIYIPVPLGTRIIDNDTKKIIIEILKINQKFLVAKGGKRGLGNTNFKSSINQTPRKKTYGTLGENKNILLELILIA
DIGTLGLPNSGKSTLITSMSNAKTKIDIYPFTTLIPILGTVKAKKKKFIIADIPGIIKNASLGIGLGIKFLKHLSRCKLL
LHIIDITINKKKINKIRYIILKELKNFNKKLFQKTRWLIFNKIDLLKPKKISQIKKYIKKKIEKNKKYYFISAKKNIGIK
KLSKDIIKYLYKKNKEYI
>Mature_338_residues
MKFVDSVIINVSAGKGGDGCISFRREKFVPKGGPDGGNGGDGGNIWIVSNTNINTLTDYRIKKIFQSENGKNGLNSNRSG
KNGKDIYIPVPLGTRIIDNDTKKIIIEILKINQKFLVAKGGKRGLGNTNFKSSINQTPRKKTYGTLGENKNILLELILIA
DIGTLGLPNSGKSTLITSMSNAKTKIDIYPFTTLIPILGTVKAKKKKFIIADIPGIIKNASLGIGLGIKFLKHLSRCKLL
LHIIDITINKKKINKIRYIILKELKNFNKKLFQKTRWLIFNKIDLLKPKKISQIKKYIKKKIEKNKKYYFISAKKNIGIK
KLSKDIIKYLYKKNKEYI

Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t

COG id: COG0536

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain

Homologues:

Organism=Homo sapiens, GI24308117, Length=304, Percent_Identity=32.8947368421053, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI111955139, Length=271, Percent_Identity=37.6383763837638, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI111955063, Length=159, Percent_Identity=34.5911949685535, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI1789574, Length=332, Percent_Identity=52.1084337349398, Blast_Score=319, Evalue=2e-88,
Organism=Caenorhabditis elegans, GI17508313, Length=323, Percent_Identity=34.6749226006192, Blast_Score=134, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17552324, Length=305, Percent_Identity=30.1639344262295, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17509631, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321962, Length=185, Percent_Identity=36.2162162162162, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6319281, Length=113, Percent_Identity=35.3982300884956, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI20129375, Length=284, Percent_Identity=36.2676056338028, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24585318, Length=274, Percent_Identity=33.9416058394161, Blast_Score=132, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OBG_BUCCC (Q057J0)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802802.1
- ProteinModelPortal:   Q057J0
- SMR:   Q057J0
- STRING:   Q057J0
- EnsemblBacteria:   EBBUCT00000001425
- GeneID:   4440700
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_241
- eggNOG:   COG0536
- GeneTree:   EBGT00050000007775
- HOGENOM:   HBG716038
- OMA:   ATCEHAG
- BioCyc:   BAPH372461:BCC_241-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01454
- InterPro:   IPR014100
- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR006169
- InterPro:   IPR002917
- InterPro:   IPR005225
- Gene3D:   G3DSA:2.70.210.12
- PANTHER:   PTHR11702:SF3
- PIRSF:   PIRSF002401
- PRINTS:   PR00326
- TIGRFAMs:   TIGR02729
- TIGRFAMs:   TIGR00231

Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; SSF82051 GTP1_OBG_sub

EC number: NA

Molecular weight: Translated: 37981; Mature: 37981

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS00905 GTP1_OBG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVDSVIINVSAGKGGDGCISFRREKFVPKGGPDGGNGGDGGNIWIVSNTNINTLTDYR
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
IKKIFQSENGKNGLNSNRSGKNGKDIYIPVPLGTRIIDNDTKKIIIEILKINQKFLVAKG
HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCEEEEECC
GKRGLGNTNFKSSINQTPRKKTYGTLGENKNILLELILIADIGTLGLPNSGKSTLITSMS
CCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCEEEEECC
NAKTKIDIYPFTTLIPILGTVKAKKKKFIIADIPGIIKNASLGIGLGIKFLKHLSRCKLL
CCCEEEEEECHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHH
LHIIDITINKKKINKIRYIILKELKNFNKKLFQKTRWLIFNKIDLLKPKKISQIKKYIKK
HHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH
KIEKNKKYYFISAKKNIGIKKLSKDIIKYLYKKNKEYI
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFVDSVIINVSAGKGGDGCISFRREKFVPKGGPDGGNGGDGGNIWIVSNTNINTLTDYR
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
IKKIFQSENGKNGLNSNRSGKNGKDIYIPVPLGTRIIDNDTKKIIIEILKINQKFLVAKG
HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCEEEEECC
GKRGLGNTNFKSSINQTPRKKTYGTLGENKNILLELILIADIGTLGLPNSGKSTLITSMS
CCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCEEEEECC
NAKTKIDIYPFTTLIPILGTVKAKKKKFIIADIPGIIKNASLGIGLGIKFLKHLSRCKLL
CCCEEEEEECHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHH
LHIIDITINKKKINKIRYIILKELKNFNKKLFQKTRWLIFNKIDLLKPKKISQIKKYIKK
HHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH
KIEKNKKYYFISAKKNIGIKKLSKDIIKYLYKKNKEYI
HHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA