Click here to switch to the map view.

The map label for this gene is ybgI [H]

Identifier: 116515119

GI number: 116515119

Start: 214091

End: 214648

Strand: Direct

Name: ybgI [H]

Synonym: BCc_183

Alternate gene names: 116515119

Gene position: 214091-214648 (Clockwise)

Preceding gene: 116515117

Following gene: 116515120

Centisome position: 51.42

GC content: 19.89

Gene sequence:

>558_bases
ATGAATAATTTTTTTCTTGAAAAAATAATTAATAAAAAATTAAATTGTAATAAATATACAAATGATTATTTACCTAATGG
TCTTCAAATAGAAGGAAAATCTGAAATAAATGTTATTATTTTAGGTGTAACAGCTAATGAAAACCTTTTAAATATAGCTA
TAAAAAAAAAAGCTGATGCAGTTATCGTACATCATGGATATTTTTGGAATAATGAAGAAAAAAAAGTTCTAGGAATGAAA
AGAAATAGATTAAAGAAAATATTAACAAATAATATAAATTTATATTGTTGGCATTTACCTTTGGATATACATAAAAAATT
AGGTAATAATGTTCAATTAGGAAAATTATTAAATATTTCAATTAAAAAATATATATCTCCATATATTATTCAAGGTTATT
TTAAAAAAAAATATACAAGTACTGAATTAATTTATTTTATAGAAAAAAAATTAAATAGATCTCCTTTCCATTATGGACCT
ACAGGATCAAAATATATTCAAAATGTTTCATGGTGTACCGGAAGAGGACAAATTTTTTTAATAAAGTTGTTAATTTAA

Upstream 100 bases:

>100_bases
AATAAAATTTATTTTTAATTAAATTTTATTTAATAAAAATTTTACAAAAATAAAAATATTTTTATAAATATAAATATATA
TTAAGGTTATAATATAAAAT

Downstream 100 bases:

>100_bases
ATATTGATGCATATTTTACAGGAGAAATTTCTGAAGAAACAATACATATTGCTGAAGAAAATAATAAACATTTTTTTTCT
TTAGGACATCATGCTACAGA

Product: YbgI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNNFFLEKIINKKLNCNKYTNDYLPNGLQIEGKSEINVIILGVTANENLLNIAIKKKADAVIVHHGYFWNNEEKKVLGMK
RNRLKKILTNNINLYCWHLPLDIHKKLGNNVQLGKLLNISIKKYISPYIIQGYFKKKYTSTELIYFIEKKLNRSPFHYGP
TGSKYIQNVSWCTGRGQIFLIKLLI

Sequences:

>Translated_185_residues
MNNFFLEKIINKKLNCNKYTNDYLPNGLQIEGKSEINVIILGVTANENLLNIAIKKKADAVIVHHGYFWNNEEKKVLGMK
RNRLKKILTNNINLYCWHLPLDIHKKLGNNVQLGKLLNISIKKYISPYIIQGYFKKKYTSTELIYFIEKKLNRSPFHYGP
TGSKYIQNVSWCTGRGQIFLIKLLI
>Mature_185_residues
MNNFFLEKIINKKLNCNKYTNDYLPNGLQIEGKSEINVIILGVTANENLLNIAIKKKADAVIVHHGYFWNNEEKKVLGMK
RNRLKKILTNNINLYCWHLPLDIHKKLGNNVQLGKLLNISIKKYISPYIIQGYFKKKYTSTELIYFIEKKLNRSPFHYGP
TGSKYIQNVSWCTGRGQIFLIKLLI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=180, Percent_Identity=51.1111111111111, Blast_Score=196, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 21576; Mature: 21576

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFFLEKIINKKLNCNKYTNDYLPNGLQIEGKSEINVIILGVTANENLLNIAIKKKADA
CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEEECCCCE
VIVHHGYFWNNEEKKVLGMKRNRLKKILTNNINLYCWHLPLDIHKKLGNNVQLGKLLNIS
EEEEECEEECCCCCEEECHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCEEECCEEEEE
IKKYISPYIIQGYFKKKYTSTELIYFIEKKLNRSPFHYGPTGSKYIQNVSWCTGRGQIFL
HHHHCCHHHHHHHHHHCCCCHHEEEEEEHHCCCCCCCCCCCCHHHHCCCEEECCCCCEEE
IKLLI
EEEEC
>Mature Secondary Structure
MNNFFLEKIINKKLNCNKYTNDYLPNGLQIEGKSEINVIILGVTANENLLNIAIKKKADA
CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEEECCCCE
VIVHHGYFWNNEEKKVLGMKRNRLKKILTNNINLYCWHLPLDIHKKLGNNVQLGKLLNIS
EEEEECEEECCCCCEEECHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCEEECCEEEEE
IKKYISPYIIQGYFKKKYTSTELIYFIEKKLNRSPFHYGPTGSKYIQNVSWCTGRGQIFL
HHHHCCHHHHHHHHHHCCCCHHEEEEEEHHCCCCCCCCCCCCHHHHCCCEEECCCCCEEE
IKLLI
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]