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The map label for this gene is dnaQ [H]

Identifier: 116515093

GI number: 116515093

Start: 185343

End: 186038

Strand: Direct

Name: dnaQ [H]

Synonym: BCc_156

Alternate gene names: 116515093

Gene position: 185343-186038 (Clockwise)

Preceding gene: 116515091

Following gene: 116515094

Centisome position: 44.51

GC content: 17.67

Gene sequence:

>696_bases
ATGATTAAAAAAAATCTTAGACAAGTATTTCTAGATATAGAAACTACTGGTATGAATAAGTATGGTTGTATATATTTAAA
TCATAAAATTATAGAAATAGGGATTATAGAAACAATTAATAGAAAATATACTGGTAGATATATACATTATTATTTATACC
CTCAACGATCAATTGAATCATCAGCATATAAAATTCATGGAATATCTGAAAGTTTTTTATCAAATAAACCAACTTTTAAA
GATATATATAAAGAAATTTTTAATTTTATTAAAAATTCTGAAATTATTGTTCATAATTCTAATTTTGATATTAGTTTTTT
AGATTATGAATTTTTTTTATTAAATATTGGTATTAATAAAATTAAAACTTTTTCTACTATTACAGATACTTTATTTATTG
CTAGAAAATTATTTCCTGGAAAAAAAAATAATTTAGATGCATTATGTGCTCGTTATAAAATAACTAATATAAATAGAAAT
TTTCATAGTGCTTTATTAGATGCAAAAATATTAATGAAATTATATATGTATATGACTAGTATACAAAAGGAAATAAATTT
CAGTAGAAACTACATTAAAAAAATTAAAATACCAAAAAATTTTTTTAAATATTATAAAAAACCATTAAAAATTATTTTTG
CAACTAAAAAAGAAAATCAAACTCATCTAGAGTATATGAAAAAAATTATAAAATAA

Upstream 100 bases:

>100_bases
CCGCTTAGCTCCAATGTTTTTTAGTTTTTTGTCTTAGTATATTAAGCATTACGTTAATTTTTATAATTTATTTAACATAT
ATATTTTATATAATAAAAAT

Downstream 100 bases:

>100_bases
TTATATATAAAGTATATATTTTAAAAACTATTTTATTCTTAGTTCATTTATATAAATATATTATTTATATTTAATTATTT
TAAATAGAAGGTGTGGTAGT

Product: DNA polymerase III, e subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIKKNLRQVFLDIETTGMNKYGCIYLNHKIIEIGIIETINRKYTGRYIHYYLYPQRSIESSAYKIHGISESFLSNKPTFK
DIYKEIFNFIKNSEIIVHNSNFDISFLDYEFFLLNIGINKIKTFSTITDTLFIARKLFPGKKNNLDALCARYKITNINRN
FHSALLDAKILMKLYMYMTSIQKEINFSRNYIKKIKIPKNFFKYYKKPLKIIFATKKENQTHLEYMKKIIK

Sequences:

>Translated_231_residues
MIKKNLRQVFLDIETTGMNKYGCIYLNHKIIEIGIIETINRKYTGRYIHYYLYPQRSIESSAYKIHGISESFLSNKPTFK
DIYKEIFNFIKNSEIIVHNSNFDISFLDYEFFLLNIGINKIKTFSTITDTLFIARKLFPGKKNNLDALCARYKITNINRN
FHSALLDAKILMKLYMYMTSIQKEINFSRNYIKKIKIPKNFFKYYKKPLKIIFATKKENQTHLEYMKKIIK
>Mature_231_residues
MIKKNLRQVFLDIETTGMNKYGCIYLNHKIIEIGIIETINRKYTGRYIHYYLYPQRSIESSAYKIHGISESFLSNKPTFK
DIYKEIFNFIKNSEIIVHNSNFDISFLDYEFFLLNIGINKIKTFSTITDTLFIARKLFPGKKNNLDALCARYKITNINRN
FHSALLDAKILMKLYMYMTSIQKEINFSRNYIKKIKIPKNFFKYYKKPLKIIFATKKENQTHLEYMKKIIK

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=219, Percent_Identity=45.2054794520548, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 27620; Mature: 27620

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKNLRQVFLDIETTGMNKYGCIYLNHKIIEIGIIETINRKYTGRYIHYYLYPQRSIES
CCHHHHHHHEEEEEECCCCCEEEEEEECEEEEEEEEHHHCCCCCCEEEEEEECCCCCCCC
SAYKIHGISESFLSNKPTFKDIYKEIFNFIKNSEIIVHNSNFDISFLDYEFFLLNIGINK
CCEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEECCHHH
IKTFSTITDTLFIARKLFPGKKNNLDALCARYKITNINRNFHSALLDAKILMKLYMYMTS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH
IQKEINFSRNYIKKIKIPKNFFKYYKKPLKIIFATKKENQTHLEYMKKIIK
HHHHHCCCHHHHHHCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHC
>Mature Secondary Structure
MIKKNLRQVFLDIETTGMNKYGCIYLNHKIIEIGIIETINRKYTGRYIHYYLYPQRSIES
CCHHHHHHHEEEEEECCCCCEEEEEEECEEEEEEEEHHHCCCCCCEEEEEEECCCCCCCC
SAYKIHGISESFLSNKPTFKDIYKEIFNFIKNSEIIVHNSNFDISFLDYEFFLLNIGINK
CCEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEECCHHH
IKTFSTITDTLFIARKLFPGKKNNLDALCARYKITNINRNFHSALLDAKILMKLYMYMTS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH
IQKEINFSRNYIKKIKIPKNFFKYYKKPLKIIFATKKENQTHLEYMKKIIK
HHHHHCCCHHHHHHCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3023634; 6316347; 3540531; 9278503; 1575709 [H]