Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is aceE [H]
Identifier: 116515071
GI number: 116515071
Start: 152550
End: 155210
Strand: Direct
Name: aceE [H]
Synonym: BCc_131
Alternate gene names: 116515071
Gene position: 152550-155210 (Clockwise)
Preceding gene: 116515070
Following gene: 116515072
Centisome position: 36.64
GC content: 25.44
Gene sequence:
>2661_bases ATGTCAAAAGATATTTTTAAAGATACTGATATTCTTGAAACTAATGAATGGATAGAATCAATTAATTCTGTAATTTCTAG ATGTGGTAAGAAAAGAGCTTGTTTTTTAATAAATAAATTATTAAATTTAGATGTATTACAAGATTATCATTTATATAAAA AAAATTTTACTCATTATATTAATACTATTCATGTTAATGATGAATTTAAATATCCTGGTAATATTTATTTAGAAGAAAAA ATTTGTTCAGCTGTTCGTTGGAATGCTATTATGATAGTATTACATGCTTCGAGAAAAAATTTAGATTTAGGTGGACATAT TTCTTCTTTTCAATCTTCCGCTATGATTTATGAAGTGTGTTTTAATCATTTTTTTCGCGCTTCTAATAATTATGATGGAG GTGATTTAATTTATTTTCAAGGGCATTCAGCTCCAGGTATTTATGCTAGAGCATTTTTAGAAAATCGTTTAACAGATAAA CAAATGTATAATTTTAGACAAGAAACTAATAATTTAGGTTTATCTTCGTATCCTCATCCTAAATTAATGTCTAATTTTTG GCAATTTCCAACTGTTTCTATGGGTTTAAGTGCAATTTCTGCAATCTATCAAGCAAAATTTTTAAAATATTTAATGAATA GAAATTTGAAAGATACATCTAAACAAAAAGTTTATGCTTTTTTAGGTGATGGAGAAATGGATGAATCAGAATCAAAAGGA GCTATAACAATAGCAGCAAGGGAAAAATTAGATAATTTAATCTTTGTAGTGAATTGTAATTTACAACGTTTAGATGGTCC GGTGTTAGGAAACGGGAAAATTATTAATGAATTAAATGATATTTTTTCTGGTGCAGGTTGGTATGTTATTAAGGTAATTT GGGGAAGTGAATGGGATTATTTATTAAAAAAAGATTATTCAGGACATTTAAAAAAATTAATGAATGAAACATTAGATGGA GATTATCAAACTTTTAGTTCAAAAAATGGTGCTTATATTCGTAAACATTTTTTTGGTAGATATAAAGAAACTAAAAAATT AGTAGAAAATATGACAGACAATGATATTGAAAATTTAAAAAAGGGTGGGCATGATTTTAAAAAAATTTATTCAGCTTTTT GTTTAGCACAATCAATAAAAAATAAACCAGTTATTATATTAATACATACTATTAAGGGATATGGTTTAGGGAAAATTGCT GAAGGAAAAAATATTGCTCATCAAATAAAGAATTTAGATATACAAGATTTAGAACATTTAAAAAAACATTTAAAAATAGA ATTAGATTCTAAATCCACAAAACAATTATCTTTTATAAAATTTTCTTCTAATTCTGAAGAATATAAATATATATGTAATC AAAGAAAAAAATTATATGGATATGTTCCTAAAAGATTAGAAAATTTTACTGAAAAATTAGTTATACCAGAATTAAATGAT TTTTCTTCTTTATTTAAAGAACAAAAAAGACCAATTTCAACAACTGTTATTTTTATTCGAATATTAAATATTTTATTAAA AAATATTCATTTAAAAAATAGAATTGTTCCAATTATTGCAGATGAAGCTCGTACTTTCGGTATGGAAGGTTTTTTTCGTC AGATTGGAATTTATAATTATCAAGGACAAAAATATATACCAGCTGATAAAGATCAGTTTTTTTATTATAAAGAAGATTAT ACGGGACAAATTTTACAAGAAGGTATAAATGAATTAGGTGCTTGTTCTTCTTGGTTAGCTGCAGCTACTTCTTATAGTAC TAATAATTTTCCAATGATACCTTTTTATATTTATTATTCCATGTTTGGTTTTCAAAGAATAGGAGATTTTTTATGGTCTT GTGGAGATCAAAAAGCTAGGGGTTTTTTAATAGGTGCTACTGCAGGTAAAACTACTTTAAATGGAGAAGGATTACAACAT GCTGATGGTCATAGTCATATTTTATCATCTACTATTCCTAATTGTGTATCGTATGATCCAACATATAGTTATGAACTTGC AGTAATTATACAATCTGGATTAACTAGAATGTATGGAGAAAAACAAGAAGATATTTTTTATTATATTACTACATATAATG AAAATTATGTAATGCCTAAAATGTCTGAAGATATGGTTTATGGTATTTGTAAAGGAGCATATAAATTAGATACTTTAAAA GGAAATAATGGTCATATTCAATTTTTAGGGTCAGGTTCTATTTTATGTGTTATAAGAAATGCAGCTGATATCTTATTGTC AGATTATAATATTGGTTCTGATATTTATAGTGTTACTTCATTTACAGAAATTGCTCGTGATGGTCAAGATTGTTTTCGTT GGAATATGCGAAATCCTTTGAGTAAAAAAAGAACACCGTATATTACTAGTATTATGAATAATTCTCCTGCTATTGCAGTT ACAGATTATATGAAAATTTTTTCAGAACAAATTCGTGCATATATACCTGCAAAAGTATTTAATGTTTTAGGAACAGATGG ATATGGTAGATCAGATAGTCGTGAAAAATTACGTTGTTTTTTTGAAATTGACGAAACAAATATTATTTGTTCTGCATTAC ATGCATTAGTAGTACAAGGTGATATAGATTCTAGTATATTTTTAGATGCATTAAAAAAATTTAATATTTTTTCAAATAAA TTGAATCCACGTTTAGCATAA
Upstream 100 bases:
>100_bases AAATCATTTTTAATATTTAATATTTTTAAAGAAATAAGTAATAAACTATTTAAAATTAATTTATAAAATTTTAAGTTTAA TATTTAAAGGATTATGAAAT
Downstream 100 bases:
>100_bases GAGGTGATATAGTGGACGTAGAAGTTCGTGTACCAGATATTGGAATTAAAGATGTTGAAGTAATTGAAATTTTCGTAAAA AAAGGAGATATAGTTAGTAA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 886; Mature: 885
Protein sequence:
>886_residues MSKDIFKDTDILETNEWIESINSVISRCGKKRACFLINKLLNLDVLQDYHLYKKNFTHYINTIHVNDEFKYPGNIYLEEK ICSAVRWNAIMIVLHASRKNLDLGGHISSFQSSAMIYEVCFNHFFRASNNYDGGDLIYFQGHSAPGIYARAFLENRLTDK QMYNFRQETNNLGLSSYPHPKLMSNFWQFPTVSMGLSAISAIYQAKFLKYLMNRNLKDTSKQKVYAFLGDGEMDESESKG AITIAAREKLDNLIFVVNCNLQRLDGPVLGNGKIINELNDIFSGAGWYVIKVIWGSEWDYLLKKDYSGHLKKLMNETLDG DYQTFSSKNGAYIRKHFFGRYKETKKLVENMTDNDIENLKKGGHDFKKIYSAFCLAQSIKNKPVIILIHTIKGYGLGKIA EGKNIAHQIKNLDIQDLEHLKKHLKIELDSKSTKQLSFIKFSSNSEEYKYICNQRKKLYGYVPKRLENFTEKLVIPELND FSSLFKEQKRPISTTVIFIRILNILLKNIHLKNRIVPIIADEARTFGMEGFFRQIGIYNYQGQKYIPADKDQFFYYKEDY TGQILQEGINELGACSSWLAAATSYSTNNFPMIPFYIYYSMFGFQRIGDFLWSCGDQKARGFLIGATAGKTTLNGEGLQH ADGHSHILSSTIPNCVSYDPTYSYELAVIIQSGLTRMYGEKQEDIFYYITTYNENYVMPKMSEDMVYGICKGAYKLDTLK GNNGHIQFLGSGSILCVIRNAADILLSDYNIGSDIYSVTSFTEIARDGQDCFRWNMRNPLSKKRTPYITSIMNNSPAIAV TDYMKIFSEQIRAYIPAKVFNVLGTDGYGRSDSREKLRCFFEIDETNIICSALHALVVQGDIDSSIFLDALKKFNIFSNK LNPRLA
Sequences:
>Translated_886_residues MSKDIFKDTDILETNEWIESINSVISRCGKKRACFLINKLLNLDVLQDYHLYKKNFTHYINTIHVNDEFKYPGNIYLEEK ICSAVRWNAIMIVLHASRKNLDLGGHISSFQSSAMIYEVCFNHFFRASNNYDGGDLIYFQGHSAPGIYARAFLENRLTDK QMYNFRQETNNLGLSSYPHPKLMSNFWQFPTVSMGLSAISAIYQAKFLKYLMNRNLKDTSKQKVYAFLGDGEMDESESKG AITIAAREKLDNLIFVVNCNLQRLDGPVLGNGKIINELNDIFSGAGWYVIKVIWGSEWDYLLKKDYSGHLKKLMNETLDG DYQTFSSKNGAYIRKHFFGRYKETKKLVENMTDNDIENLKKGGHDFKKIYSAFCLAQSIKNKPVIILIHTIKGYGLGKIA EGKNIAHQIKNLDIQDLEHLKKHLKIELDSKSTKQLSFIKFSSNSEEYKYICNQRKKLYGYVPKRLENFTEKLVIPELND FSSLFKEQKRPISTTVIFIRILNILLKNIHLKNRIVPIIADEARTFGMEGFFRQIGIYNYQGQKYIPADKDQFFYYKEDY TGQILQEGINELGACSSWLAAATSYSTNNFPMIPFYIYYSMFGFQRIGDFLWSCGDQKARGFLIGATAGKTTLNGEGLQH ADGHSHILSSTIPNCVSYDPTYSYELAVIIQSGLTRMYGEKQEDIFYYITTYNENYVMPKMSEDMVYGICKGAYKLDTLK GNNGHIQFLGSGSILCVIRNAADILLSDYNIGSDIYSVTSFTEIARDGQDCFRWNMRNPLSKKRTPYITSIMNNSPAIAV TDYMKIFSEQIRAYIPAKVFNVLGTDGYGRSDSREKLRCFFEIDETNIICSALHALVVQGDIDSSIFLDALKKFNIFSNK LNPRLA >Mature_885_residues SKDIFKDTDILETNEWIESINSVISRCGKKRACFLINKLLNLDVLQDYHLYKKNFTHYINTIHVNDEFKYPGNIYLEEKI CSAVRWNAIMIVLHASRKNLDLGGHISSFQSSAMIYEVCFNHFFRASNNYDGGDLIYFQGHSAPGIYARAFLENRLTDKQ MYNFRQETNNLGLSSYPHPKLMSNFWQFPTVSMGLSAISAIYQAKFLKYLMNRNLKDTSKQKVYAFLGDGEMDESESKGA ITIAAREKLDNLIFVVNCNLQRLDGPVLGNGKIINELNDIFSGAGWYVIKVIWGSEWDYLLKKDYSGHLKKLMNETLDGD YQTFSSKNGAYIRKHFFGRYKETKKLVENMTDNDIENLKKGGHDFKKIYSAFCLAQSIKNKPVIILIHTIKGYGLGKIAE GKNIAHQIKNLDIQDLEHLKKHLKIELDSKSTKQLSFIKFSSNSEEYKYICNQRKKLYGYVPKRLENFTEKLVIPELNDF SSLFKEQKRPISTTVIFIRILNILLKNIHLKNRIVPIIADEARTFGMEGFFRQIGIYNYQGQKYIPADKDQFFYYKEDYT GQILQEGINELGACSSWLAAATSYSTNNFPMIPFYIYYSMFGFQRIGDFLWSCGDQKARGFLIGATAGKTTLNGEGLQHA DGHSHILSSTIPNCVSYDPTYSYELAVIIQSGLTRMYGEKQEDIFYYITTYNENYVMPKMSEDMVYGICKGAYKLDTLKG NNGHIQFLGSGSILCVIRNAADILLSDYNIGSDIYSVTSFTEIARDGQDCFRWNMRNPLSKKRTPYITSIMNNSPAIAVT DYMKIFSEQIRAYIPAKVFNVLGTDGYGRSDSREKLRCFFEIDETNIICSALHALVVQGDIDSSIFLDALKKFNIFSNKL NPRLA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=887, Percent_Identity=64.0360766629087, Blast_Score=1223, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 101533; Mature: 101402
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDIFKDTDILETNEWIESINSVISRCGKKRACFLINKLLNLDVLQDYHLYKKNFTHYI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE NTIHVNDEFKYPGNIYLEEKICSAVRWNAIMIVLHASRKNLDLGGHISSFQSSAMIYEVC EEEEECCCCCCCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH FNHFFRASNNYDGGDLIYFQGHSAPGIYARAFLENRLTDKQMYNFRQETNNLGLSSYPHP HHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH KLMSNFWQFPTVSMGLSAISAIYQAKFLKYLMNRNLKDTSKQKVYAFLGDGEMDESESKG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC AITIAAREKLDNLIFVVNCNLQRLDGPVLGNGKIINELNDIFSGAGWYVIKVIWGSEWDY EEEEEEHHCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCH LLKKDYSGHLKKLMNETLDGDYQTFSSKNGAYIRKHFFGRYKETKKLVENMTDNDIENLK HHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KGGHDFKKIYSAFCLAQSIKNKPVIILIHTIKGYGLGKIAEGKNIAHQIKNLDIQDLEHL HCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHH KKHLKIELDSKSTKQLSFIKFSSNSEEYKYICNQRKKLYGYVPKRLENFTEKLVIPELND HHHCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHH FSSLFKEQKRPISTTVIFIRILNILLKNIHLKNRIVPIIADEARTFGMEGFFRQIGIYNY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHCCEEC QGQKYIPADKDQFFYYKEDYTGQILQEGINELGACSSWLAAATSYSTNNFPMIPFYIYYS CCCEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH MFGFQRIGDFLWSCGDQKARGFLIGATAGKTTLNGEGLQHADGHSHILSSTIPNCVSYDP HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC TYSYELAVIIQSGLTRMYGEKQEDIFYYITTYNENYVMPKMSEDMVYGICKGAYKLDTLK CCCEEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCCHHHHHHHCCCEEEEEEE GNNGHIQFLGSGSILCVIRNAADILLSDYNIGSDIYSVTSFTEIARDGQDCFRWNMRNPL CCCCEEEEEECCCEEEEEECCCHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCC SKKRTPYITSIMNNSPAIAVTDYMKIFSEQIRAYIPAKVFNVLGTDGYGRSDSREKLRCF CCCCCCCEEHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEE FEIDETNIICSALHALVVQGDIDSSIFLDALKKFNIFSNKLNPRLA EEECCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SKDIFKDTDILETNEWIESINSVISRCGKKRACFLINKLLNLDVLQDYHLYKKNFTHYI CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE NTIHVNDEFKYPGNIYLEEKICSAVRWNAIMIVLHASRKNLDLGGHISSFQSSAMIYEVC EEEEECCCCCCCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH FNHFFRASNNYDGGDLIYFQGHSAPGIYARAFLENRLTDKQMYNFRQETNNLGLSSYPHP HHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH KLMSNFWQFPTVSMGLSAISAIYQAKFLKYLMNRNLKDTSKQKVYAFLGDGEMDESESKG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC AITIAAREKLDNLIFVVNCNLQRLDGPVLGNGKIINELNDIFSGAGWYVIKVIWGSEWDY EEEEEEHHCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCH LLKKDYSGHLKKLMNETLDGDYQTFSSKNGAYIRKHFFGRYKETKKLVENMTDNDIENLK HHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KGGHDFKKIYSAFCLAQSIKNKPVIILIHTIKGYGLGKIAEGKNIAHQIKNLDIQDLEHL HCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHH KKHLKIELDSKSTKQLSFIKFSSNSEEYKYICNQRKKLYGYVPKRLENFTEKLVIPELND HHHCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHH FSSLFKEQKRPISTTVIFIRILNILLKNIHLKNRIVPIIADEARTFGMEGFFRQIGIYNY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHCCEEC QGQKYIPADKDQFFYYKEDYTGQILQEGINELGACSSWLAAATSYSTNNFPMIPFYIYYS CCCEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH MFGFQRIGDFLWSCGDQKARGFLIGATAGKTTLNGEGLQHADGHSHILSSTIPNCVSYDP HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC TYSYELAVIIQSGLTRMYGEKQEDIFYYITTYNENYVMPKMSEDMVYGICKGAYKLDTLK CCCEEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCCHHHHHHHCCCEEEEEEE GNNGHIQFLGSGSILCVIRNAADILLSDYNIGSDIYSVTSFTEIARDGQDCFRWNMRNPL CCCCEEEEEECCCEEEEEECCCHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCC SKKRTPYITSIMNNSPAIAVTDYMKIFSEQIRAYIPAKVFNVLGTDGYGRSDSREKLRCF CCCCCCCEEHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEE FEIDETNIICSALHALVVQGDIDSSIFLDALKKFNIFSNKLNPRLA EEECCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]