Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is prsA [H]
Identifier: 116515051
GI number: 116515051
Start: 126199
End: 127152
Strand: Reverse
Name: prsA [H]
Synonym: BCc_110
Alternate gene names: 116515051
Gene position: 127152-126199 (Counterclockwise)
Preceding gene: 116515057
Following gene: 116515037
Centisome position: 30.54
GC content: 25.16
Gene sequence:
>954_bases ATGGAAAAAATTAAGTTATTCTCTGGAAATTCTGTATTAACTTTAGCGAAAAAAATTGCTAATCAATTAAAAATTGATTT AGGGAATGCAACAGTTAGCAAATTTAGTGATGGTGAAATTAGTGTACAAATTAATGAAAACATTAGAGGATCTGATGTAT TTTTAATTCAATCTACTTGTTCTCCAACAAATGATAATTTTATGGAATTAATTATCATGATAGATGCACTTAGAAGAGCA TCTGCAGGAAGAATTACTGCGGTAATTCCATATTTTGGTTATGCTAGACAAGATAGAAGAATACGATCATCAAGAGTACC AATTACAGCTAAAGTAATTGCTGACTTTTTATCAAATGTAGGAGTAAATCGTATTTTAACTATTGATTTACATTCTGAAC AAATTCAAGGTTTTTTTAATATTCCTATAGATAATATTTCTAGTAGTACAATATTATTAAAAAATTTATTAGAATATAAA TTTTTTAATCCTATTTTTGTATCTCCAGATATTGGAGGAATTATTAGAACAAGAGAAATAGCAAAATTATTATTTGATTC AGAAATAGCAATTATTGATAAACGTCGACCTAGTGCAAATAAATCTCAAGTTATGAATATTATTGGAAAAGTAAAAAACC GAGATTGTATTCTAATAGATGATATTATTGATACAGGAACTACTTTATATAATGCAGCAAAAGCACTTAAAAAAAATGGA GCAAATCGAATTTTTGCATATGCTACACATCCAATTTTTTCAGGACAGGCAGAAAAAAATCTTAAAAAATCATATATTGA TAATATTATCATTTGTGATACTATTCCTTTATCAAATAAGATTCAAAATCTTAAAAAAATATATATAATATCAGTTTCCA AAATATTAGCTGAAGCAATTAGAAGAATTAATAACGAAGAATCTATTTCTGAGATGTTTAATTTATTGTTATAA
Upstream 100 bases:
>100_bases AAAAAACTTTTTTTATAAAATTATTTGAAATATTTATATTTTCTATATAATAAAATATATCTTAATAAATTAATCTCATA TATTTTATTAAAAGGTAAAA
Downstream 100 bases:
>100_bases TAACATCATTTCAAAATGTTAAATAATAAATGTTGGAAAATATTCCAACATTATATTATAAAGATAATTTTAAAATTTAA TAAATATTTAAAAAATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MEKIKLFSGNSVLTLAKKIANQLKIDLGNATVSKFSDGEISVQINENIRGSDVFLIQSTCSPTNDNFMELIIMIDALRRA SAGRITAVIPYFGYARQDRRIRSSRVPITAKVIADFLSNVGVNRILTIDLHSEQIQGFFNIPIDNISSSTILLKNLLEYK FFNPIFVSPDIGGIIRTREIAKLLFDSEIAIIDKRRPSANKSQVMNIIGKVKNRDCILIDDIIDTGTTLYNAAKALKKNG ANRIFAYATHPIFSGQAEKNLKKSYIDNIIICDTIPLSNKIQNLKKIYIISVSKILAEAIRRINNEESISEMFNLLL
Sequences:
>Translated_317_residues MEKIKLFSGNSVLTLAKKIANQLKIDLGNATVSKFSDGEISVQINENIRGSDVFLIQSTCSPTNDNFMELIIMIDALRRA SAGRITAVIPYFGYARQDRRIRSSRVPITAKVIADFLSNVGVNRILTIDLHSEQIQGFFNIPIDNISSSTILLKNLLEYK FFNPIFVSPDIGGIIRTREIAKLLFDSEIAIIDKRRPSANKSQVMNIIGKVKNRDCILIDDIIDTGTTLYNAAKALKKNG ANRIFAYATHPIFSGQAEKNLKKSYIDNIIICDTIPLSNKIQNLKKIYIISVSKILAEAIRRINNEESISEMFNLLL >Mature_317_residues MEKIKLFSGNSVLTLAKKIANQLKIDLGNATVSKFSDGEISVQINENIRGSDVFLIQSTCSPTNDNFMELIIMIDALRRA SAGRITAVIPYFGYARQDRRIRSSRVPITAKVIADFLSNVGVNRILTIDLHSEQIQGFFNIPIDNISSSTILLKNLLEYK FFNPIFVSPDIGGIIRTREIAKLLFDSEIAIIDKRRPSANKSQVMNIIGKVKNRDCILIDDIIDTGTTLYNAAKALKKNG ANRIFAYATHPIFSGQAEKNLKKSYIDNIIICDTIPLSNKIQNLKKIYIISVSKILAEAIRRINNEESISEMFNLLL
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=316, Percent_Identity=45.8860759493671, Blast_Score=280, Evalue=1e-75, Organism=Homo sapiens, GI84875539, Length=320, Percent_Identity=45.625, Blast_Score=280, Evalue=1e-75, Organism=Homo sapiens, GI4506129, Length=318, Percent_Identity=45.9119496855346, Blast_Score=279, Evalue=2e-75, Organism=Homo sapiens, GI28557709, Length=318, Percent_Identity=45.5974842767296, Blast_Score=275, Evalue=4e-74, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=35.5491329479769, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI194018537, Length=346, Percent_Identity=34.1040462427746, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI310128524, Length=138, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310115209, Length=138, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310118259, Length=138, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310119946, Length=138, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1787458, Length=313, Percent_Identity=67.0926517571885, Blast_Score=463, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17554702, Length=316, Percent_Identity=42.7215189873418, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI25149168, Length=316, Percent_Identity=42.7215189873418, Blast_Score=260, Evalue=5e-70, Organism=Caenorhabditis elegans, GI71989924, Length=316, Percent_Identity=42.7215189873418, Blast_Score=259, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=42.443729903537, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=32.5443786982249, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321776, Length=312, Percent_Identity=40.7051282051282, Blast_Score=239, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6319403, Length=314, Percent_Identity=42.6751592356688, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6320946, Length=314, Percent_Identity=43.312101910828, Blast_Score=234, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6322667, Length=186, Percent_Identity=38.7096774193548, Blast_Score=136, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6324511, Length=113, Percent_Identity=44.2477876106195, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI21355239, Length=318, Percent_Identity=45.2830188679245, Blast_Score=270, Evalue=9e-73, Organism=Drosophila melanogaster, GI45551540, Length=340, Percent_Identity=42.3529411764706, Blast_Score=261, Evalue=4e-70, Organism=Drosophila melanogaster, GI24651458, Length=356, Percent_Identity=32.8651685393258, Blast_Score=177, Evalue=8e-45, Organism=Drosophila melanogaster, GI24651456, Length=356, Percent_Identity=32.8651685393258, Blast_Score=177, Evalue=8e-45, Organism=Drosophila melanogaster, GI281362873, Length=356, Percent_Identity=32.8651685393258, Blast_Score=177, Evalue=8e-45, Organism=Drosophila melanogaster, GI24651454, Length=356, Percent_Identity=32.8651685393258, Blast_Score=177, Evalue=8e-45, Organism=Drosophila melanogaster, GI24651462, Length=155, Percent_Identity=38.0645161290323, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24651464, Length=155, Percent_Identity=38.0645161290323, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI45552010, Length=155, Percent_Identity=38.0645161290323, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 35484; Mature: 35484
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIKLFSGNSVLTLAKKIANQLKIDLGNATVSKFSDGEISVQINENIRGSDVFLIQSTC CCCEEEECCCCHHHHHHHHHHHHEEECCCCEECCCCCCEEEEEECCCCCCCEEEEEECCC SPTNDNFMELIIMIDALRRASAGRITAVIPYFGYARQDRRIRSSRVPITAKVIADFLSNV CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCC GVNRILTIDLHSEQIQGFFNIPIDNISSSTILLKNLLEYKFFNPIFVSPDIGGIIRTREI CCCEEEEEEECHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH AKLLFDSEIAIIDKRRPSANKSQVMNIIGKVKNRDCILIDDIIDTGTTLYNAAKALKKNG HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCC ANRIFAYATHPIFSGQAEKNLKKSYIDNIIICDTIPLSNKIQNLKKIYIISVSKILAEAI CCEEEEEEECCEECCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHEEEEEEHHHHHHHHH RRINNEESISEMFNLLL HHCCCHHHHHHHHHHHC >Mature Secondary Structure MEKIKLFSGNSVLTLAKKIANQLKIDLGNATVSKFSDGEISVQINENIRGSDVFLIQSTC CCCEEEECCCCHHHHHHHHHHHHEEECCCCEECCCCCCEEEEEECCCCCCCEEEEEECCC SPTNDNFMELIIMIDALRRASAGRITAVIPYFGYARQDRRIRSSRVPITAKVIADFLSNV CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCC GVNRILTIDLHSEQIQGFFNIPIDNISSSTILLKNLLEYKFFNPIFVSPDIGGIIRTREI CCCEEEEEEECHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH AKLLFDSEIAIIDKRRPSANKSQVMNIIGKVKNRDCILIDDIIDTGTTLYNAAKALKKNG HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCC ANRIFAYATHPIFSGQAEKNLKKSYIDNIIICDTIPLSNKIQNLKKIYIISVSKILAEAI CCEEEEEEECCEECCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHEEEEEEHHHHHHHHH RRINNEESISEMFNLLL HHCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]