Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is talA
Identifier: 116514999
GI number: 116514999
Start: 62504
End: 63460
Strand: Direct
Name: talA
Synonym: BCc_057
Alternate gene names: 116514999
Gene position: 62504-63460 (Clockwise)
Preceding gene: 116514998
Following gene: 116515000
Centisome position: 15.01
GC content: 23.93
Gene sequence:
>957_bases ATGAATCAATTAGAATATTTAAAGAAATATACTACAGTAGTAGTAGATAGTGGTGATATAAATTATATAAAAAAATATCA ACCAAATGATGCAACAACAAATCCAACATTGATTTTAAAAAGTGTTTTATCTAATAAATATAATTATATAATTGATAATT CTATTCAATATGCTAAAGATATTGGAGGTAATAAATTAACACAAGTTAAAAATGCCAGTGATATGATTTCTGTAGGATTT GGTATTGAAATTTTAAAATATATTCCAGGATATATATCAACTGAAATTGATGCTCGATTATCATTTAATACTAAAAAATG TGTCTCAAAAGCTATTAAGTTAATAAAATTATATAACAATAATGGAATTGATACTTCAAGGGTATTAATTAAATTAGCTG CTACTTGGGAATGTATAGAAGCTGCACGTCAGTTAAAAAAAATAGGAATATTATGTAATTTGACATTATTGTTTTCTTTT GCTCAGGCTCGTGCATGTGCTGATGCGGATGTATTTTTGATATCTCCTTTTGTAGGTAGAATTTATGATTGGTATCAAAA ATTTAATTTAAATTCTCCATATTGCTCTAATACTGATCCTGGTGTAATAGCATTAAAAAAAATATTTTTTTATTATAAAA AATATGGTTATAAAACTATTATTATGGGTGCTAGTTTTCGAAAATTAGAACAAATACAAGAATTAGTTGGTTGTGATCGT ATAACTATTTCATTAGATTTATTAAAACAATTAAGTATGAAAAAAGATATTTTAATAAAAAAATTAGATGTAAAAAAGAT TACTAAAGTTAATACTAAACCTAATGCATTATCAGAATCTGAATTTCGATTTTTACATAATGAAGACGCTATGGCGGTAG AAAAATTATCTGAAGGTATTCGTCAGTTTAGTAGTGATCAACAAGAATTAGAAAATTTTTTATTTGATAAATTATAA
Upstream 100 bases:
>100_bases TTTATTAATAATAAAATAATTTAGGTTTTTATTGATTTTAAATGATTTTAAGAATTAAATATTATTTTTTTGTATATATT TATACTATAAGGTTAAACAT
Downstream 100 bases:
>100_bases TTACTTTATTATTTTAAAAAATTATTTTTATATATAAGGAAGGTATATGTTATCTAGAAAAGATTTATCAAATGCATTAA GATTTTTAAGTATAGATGCT
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNQLEYLKKYTTVVVDSGDINYIKKYQPNDATTNPTLILKSVLSNKYNYIIDNSIQYAKDIGGNKLTQVKNASDMISVGF GIEILKYIPGYISTEIDARLSFNTKKCVSKAIKLIKLYNNNGIDTSRVLIKLAATWECIEAARQLKKIGILCNLTLLFSF AQARACADADVFLISPFVGRIYDWYQKFNLNSPYCSNTDPGVIALKKIFFYYKKYGYKTIIMGASFRKLEQIQELVGCDR ITISLDLLKQLSMKKDILIKKLDVKKITKVNTKPNALSESEFRFLHNEDAMAVEKLSEGIRQFSSDQQELENFLFDKL
Sequences:
>Translated_318_residues MNQLEYLKKYTTVVVDSGDINYIKKYQPNDATTNPTLILKSVLSNKYNYIIDNSIQYAKDIGGNKLTQVKNASDMISVGF GIEILKYIPGYISTEIDARLSFNTKKCVSKAIKLIKLYNNNGIDTSRVLIKLAATWECIEAARQLKKIGILCNLTLLFSF AQARACADADVFLISPFVGRIYDWYQKFNLNSPYCSNTDPGVIALKKIFFYYKKYGYKTIIMGASFRKLEQIQELVGCDR ITISLDLLKQLSMKKDILIKKLDVKKITKVNTKPNALSESEFRFLHNEDAMAVEKLSEGIRQFSSDQQELENFLFDKL >Mature_318_residues MNQLEYLKKYTTVVVDSGDINYIKKYQPNDATTNPTLILKSVLSNKYNYIIDNSIQYAKDIGGNKLTQVKNASDMISVGF GIEILKYIPGYISTEIDARLSFNTKKCVSKAIKLIKLYNNNGIDTSRVLIKLAATWECIEAARQLKKIGILCNLTLLFSF AQARACADADVFLISPFVGRIYDWYQKFNLNSPYCSNTDPGVIALKKIFFYYKKYGYKTIIMGASFRKLEQIQELVGCDR ITISLDLLKQLSMKKDILIKKLDVKKITKVNTKPNALSESEFRFLHNEDAMAVEKLSEGIRQFSSDQQELENFLFDKL
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI5803187, Length=316, Percent_Identity=50, Blast_Score=316, Evalue=2e-86, Organism=Escherichia coli, GI1788807, Length=318, Percent_Identity=55.0314465408805, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1786189, Length=317, Percent_Identity=52.0504731861199, Blast_Score=349, Evalue=1e-97, Organism=Caenorhabditis elegans, GI25153750, Length=319, Percent_Identity=49.2163009404389, Blast_Score=307, Evalue=6e-84, Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=48.4848484848485, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=42.2680412371134, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321480, Length=327, Percent_Identity=48.6238532110092, Blast_Score=308, Evalue=7e-85, Organism=Saccharomyces cerevisiae, GI6323386, Length=309, Percent_Identity=54.0453074433657, Blast_Score=282, Evalue=5e-77, Organism=Drosophila melanogaster, GI45549185, Length=315, Percent_Identity=52.0634920634921, Blast_Score=319, Evalue=1e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAL_BUCCC (Q058B4)
Other databases:
- EMBL: CP000263 - RefSeq: YP_802628.1 - ProteinModelPortal: Q058B4 - SMR: Q058B4 - STRING: Q058B4 - EnsemblBacteria: EBBUCT00000001311 - GeneID: 4440897 - GenomeReviews: CP000263_GR - KEGG: bcc:BCc_057 - eggNOG: COG0176 - GeneTree: EBGT00050000007734 - HOGENOM: HBG286747 - OMA: CDRITIS - ProtClustDB: PRK05269 - BioCyc: BAPH372461:BCC_057-MONOMER - GO: GO:0005737 - HAMAP: MF_00492 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - PANTHER: PTHR10683:SF3 - TIGRFAMs: TIGR00874
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 36292; Mature: 36292
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLEYLKKYTTVVVDSGDINYIKKYQPNDATTNPTLILKSVLSNKYNYIIDNSIQYAKD CCHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHH IGGNKLTQVKNASDMISVGFGIEILKYIPGYISTEIDARLSFNTKKCVSKAIKLIKLYNN CCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCCEECCCHHHHHHHHHHHHHHCCC NGIDTSRVLIKLAATWECIEAARQLKKIGILCNLTLLFSFAQARACADADVFLISPFVGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH IYDWYQKFNLNSPYCSNTDPGVIALKKIFFYYKKYGYKTIIMGASFRKLEQIQELVGCDR HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCE ITISLDLLKQLSMKKDILIKKLDVKKITKVNTKPNALSESEFRFLHNEDAMAVEKLSEGI EEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHH RQFSSDQQELENFLFDKL HHHCCHHHHHHHHHHCCC >Mature Secondary Structure MNQLEYLKKYTTVVVDSGDINYIKKYQPNDATTNPTLILKSVLSNKYNYIIDNSIQYAKD CCHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHH IGGNKLTQVKNASDMISVGFGIEILKYIPGYISTEIDARLSFNTKKCVSKAIKLIKLYNN CCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCCEECCCHHHHHHHHHHHHHHCCC NGIDTSRVLIKLAATWECIEAARQLKKIGILCNLTLLFSFAQARACADADVFLISPFVGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH IYDWYQKFNLNSPYCSNTDPGVIALKKIFFYYKKYGYKTIIMGASFRKLEQIQELVGCDR HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCE ITISLDLLKQLSMKKDILIKKLDVKKITKVNTKPNALSESEFRFLHNEDAMAVEKLSEGI EEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHH RQFSSDQQELENFLFDKL HHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA