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The map label for this gene is yajC [C]

Identifier: 116494316

GI number: 116494316

Start: 767434

End: 767853

Strand: Direct

Name: yajC [C]

Synonym: LSEI_0772

Alternate gene names: 116494316

Gene position: 767434-767853 (Clockwise)

Preceding gene: 116494315

Following gene: 116494319

Centisome position: 26.51

GC content: 46.9

Gene sequence:

>420_bases
TTGAATGGTAATATGACAATGATCATTATGCTGCTGATTTTCGTGGGCTTCATGTATTTTGGCATGGTTCGTCCGCAAAA
GAAACAACAGCAAAAGCGTCAAGAAATGTTGAATCAGCTTAAAAAGGGCGACCCCATCATCACGATCGGTGGGTTGCACG
GTGTCATTGATTCAATCGACCAGCAAGCTGGTACGGTTGTCATTGATTCTGACGGCATCTATTTAACCTTTAACTTGAGT
GCTGTTCGCGGCACAGCAACTCGTCCTGCAGCGCCTGCACCAGCCGCTACCGTGACAAAGGCTGAAGAAGCGCATAATAC
TGATGAACAACGCGAAGCTAAACCAGTTGAAGAGGCTTCACCAAGGGCTGACGATCAAACCGATGCCAAAAGTGATAGCA
AGGCAGAAGACGACAAATAG

Upstream 100 bases:

>100_bases
TACAACAAGGAAAAAGCAAAGAATTTTTAGATTATTTGGAGTAGACCGCCTAATTCTGTTACACTGTTTGTTGACAAAAT
AAAAATAAGAGGTGCCTAAA

Downstream 100 bases:

>100_bases
ATTCGTCATCTGATAGAGAATTCAATATAGGTGACGTAAGGGAAGGTGTTTAGCCTTCTCTTTTTTTGCGTTTTAAGAGC
GGATTGGCGCCCATCACGGG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNGNMTMIIMLLIFVGFMYFGMVRPQKKQQQKRQEMLNQLKKGDPIITIGGLHGVIDSIDQQAGTVVIDSDGIYLTFNLS
AVRGTATRPAAPAPAATVTKAEEAHNTDEQREAKPVEEASPRADDQTDAKSDSKAEDDK

Sequences:

>Translated_139_residues
MNGNMTMIIMLLIFVGFMYFGMVRPQKKQQQKRQEMLNQLKKGDPIITIGGLHGVIDSIDQQAGTVVIDSDGIYLTFNLS
AVRGTATRPAAPAPAATVTKAEEAHNTDEQREAKPVEEASPRADDQTDAKSDSKAEDDK
>Mature_139_residues
MNGNMTMIIMLLIFVGFMYFGMVRPQKKQQQKRQEMLNQLKKGDPIITIGGLHGVIDSIDQQAGTVVIDSDGIYLTFNLS
AVRGTATRPAAPAPAATVTKAEEAHNTDEQREAKPVEEASPRADDQTDAKSDSKAEDDK

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 15177; Mature: 15177

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGNMTMIIMLLIFVGFMYFGMVRPQKKQQQKRQEMLNQLKKGDPIITIGGLHGVIDSID
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
QQAGTVVIDSDGIYLTFNLSAVRGTATRPAAPAPAATVTKAEEAHNTDEQREAKPVEEAS
HCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHCC
PRADDQTDAKSDSKAEDDK
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNGNMTMIIMLLIFVGFMYFGMVRPQKKQQQKRQEMLNQLKKGDPIITIGGLHGVIDSID
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
QQAGTVVIDSDGIYLTFNLSAVRGTATRPAAPAPAATVTKAEEAHNTDEQREAKPVEEAS
HCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHCC
PRADDQTDAKSDSKAEDDK
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]