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The map label for this gene is hsp18 [H]

Identifier: 116494235

GI number: 116494235

Start: 689300

End: 689776

Strand: Direct

Name: hsp18 [H]

Synonym: LSEI_0687

Alternate gene names: 116494235

Gene position: 689300-689776 (Clockwise)

Preceding gene: 116494233

Following gene: 116494237

Centisome position: 23.81

GC content: 45.07

Gene sequence:

>477_bases
ATGGCTAATGAAGTTTTGAATCGTCGTAATAATGAGTTGATGAACAATGTGAATGATCCGTTCTTTGACAACTTAGCACG
CCGGTTCTTCGGCCCGGTATCTGACTGGATGGATTGGGCAACACCTGCCATCACCAGCACGGCCGTCAACGGATTACTGA
CTGATGTTAAGGAGACCAAGGACGCTTACGAAGTTCATGTGGATGTACCTGGGATTGATAAGAACAACATCAAGATGAAC
TACCACGATGGTGTTTTGAGTATTAACGTTCATAAGGACGATATCACCGACCACGCTGATAAGAACGGCAACGTCATGAT
GTCCGAACGTAACTACGGCACAATGAGTCGGAGCTATCAACTACCAAACGTTGATGCAAGCAACATCAAGGCAGCCTATC
AGGATGGTGTCCTCAATATCACCATGCCTAAGCTGACTGAATCTAAGGAGTCTGGTCACAACATTGAAATTCAATAA

Upstream 100 bases:

>100_bases
ATAACTATAGGTGGAGCGAGGGAGAAGGAACAAGAGCTTCAGAGCAAATGTGTTTCTCCCGAATCGCCAAAGTCTCTATA
TTGAAAGGAAGCTATCTGTT

Downstream 100 bases:

>100_bases
TGTTCGTCATCAGTTGACCCAAGATTTACGGACTGCATTGCAAGCATGAATAGAAGCGGCACTTCTGCCGTTAGTGGGCA
GAACCCATGAGTAAGCAAAC

Product: molecular chaperone (small heat shock protein)

Products: NA

Alternate protein names: HSP 18 [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMN
YHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ

Sequences:

>Translated_158_residues
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMN
YHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
>Mature_157_residues
ANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMNY
HDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ

Specific function: Probable chaperone [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17816; Mature: 17685

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETK
CCCHHHHHCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCC
DAYEVHVDVPGIDKNNIKMNYHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQ
CEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEE
LPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
CCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
ANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETK
CCHHHHHCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCC
DAYEVHVDVPGIDKNNIKMNYHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQ
CEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEE
LPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
CCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501044; 11466286 [H]