Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494217

Identifier: 116494217

GI number: 116494217

Start: 673290

End: 674000

Strand: Direct

Name: 116494217

Synonym: LSEI_0669

Alternate gene names: NA

Gene position: 673290-674000 (Clockwise)

Preceding gene: 116494216

Following gene: 116494218

Centisome position: 23.25

GC content: 42.62

Gene sequence:

>711_bases
ATGCAGACAAAGTTTCTTAAGTTGCCGGTCTATCAACAAGGACTTTTCTTAACGTTGATATGGCTAATGGTCGGGATTGG
CGTGATGCTATATCGCTGGCCAACAAGTGATCAGGATTTTCAAACAACCCCCTATTGGCTTGCACCGAATTTGATTCATA
TGCAAGGTGAGGTGACCGCTCAATGGTTCCCGTTTGCGTGTGCAGTGACGGCCGGTGTGAGTCTTTATGTCGTCAAGCAT
ATTAAAAGTAGAAACTGTGACACTAGAGAGGGCCTTTATGTACTTCAGAATTTGTGGCCCATCTGGTTGGTGACAATCGT
AGTATTTTTCTTATTAAATCTTTGGCTACCACAAACAGGGATGACTCGTTTTTCGAGTTTTGATCGACAAGTACTCACGA
TTGCAATACTGTTTCTTGATATTACTTTATTTAGTTCTTACATGCTTTGGTTAAACTTCTGGGTGCCGGTTGGCCGGGTA
CATAATGTCATTAAGGTTCTATTTTGGGCAGTGCTTTTCCTTGGAGCTGGATTTATTATGAGCCACTTTCAATTTACGTT
TGCCAGCAGCTCCTTTAGCTTGGACGATCTAGGACGACGTACATGGTTAACACTGCCATTTTGGCCAAGCTGGTTTTTAG
GTTTACTATTAACGGCGGTTATTTGGTGGCACACTTTTCGTCGACTTCGAATGACGGATGATTCTCACTAA

Upstream 100 bases:

>100_bases
GCTGCTTTTTTGGTTAGCATTGTGAACAAATAGTTTCAAGTTAATACATAAATGGTTACGCGGTCAAAAGACATGCAATG
TGACAAAAGGAGTCGATAGC

Downstream 100 bases:

>100_bases
AATAGAGAGACCGGCCGTGCTCACACAACTCAGCAAAAAGATTGAGGGGGTCTAACTGCTGACAAGCGTACAACCTAGTC
GGGCGAACCAGCTATCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQTKFLKLPVYQQGLFLTLIWLMVGIGVMLYRWPTSDQDFQTTPYWLAPNLIHMQGEVTAQWFPFACAVTAGVSLYVVKH
IKSRNCDTREGLYVLQNLWPIWLVTIVVFFLLNLWLPQTGMTRFSSFDRQVLTIAILFLDITLFSSYMLWLNFWVPVGRV
HNVIKVLFWAVLFLGAGFIMSHFQFTFASSSFSLDDLGRRTWLTLPFWPSWFLGLLLTAVIWWHTFRRLRMTDDSH

Sequences:

>Translated_236_residues
MQTKFLKLPVYQQGLFLTLIWLMVGIGVMLYRWPTSDQDFQTTPYWLAPNLIHMQGEVTAQWFPFACAVTAGVSLYVVKH
IKSRNCDTREGLYVLQNLWPIWLVTIVVFFLLNLWLPQTGMTRFSSFDRQVLTIAILFLDITLFSSYMLWLNFWVPVGRV
HNVIKVLFWAVLFLGAGFIMSHFQFTFASSSFSLDDLGRRTWLTLPFWPSWFLGLLLTAVIWWHTFRRLRMTDDSH
>Mature_236_residues
MQTKFLKLPVYQQGLFLTLIWLMVGIGVMLYRWPTSDQDFQTTPYWLAPNLIHMQGEVTAQWFPFACAVTAGVSLYVVKH
IKSRNCDTREGLYVLQNLWPIWLVTIVVFFLLNLWLPQTGMTRFSSFDRQVLTIAILFLDITLFSSYMLWLNFWVPVGRV
HNVIKVLFWAVLFLGAGFIMSHFQFTFASSSFSLDDLGRRTWLTLPFWPSWFLGLLLTAVIWWHTFRRLRMTDDSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27775; Mature: 27775

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKFLKLPVYQQGLFLTLIWLMVGIGVMLYRWPTSDQDFQTTPYWLAPNLIHMQGEVTA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCEEEECCCCCH
QWFPFACAVTAGVSLYVVKHIKSRNCDTREGLYVLQNLWPIWLVTIVVFFLLNLWLPQTG
HHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MTRFSSFDRQVLTIAILFLDITLFSSYMLWLNFWVPVGRVHNVIKVLFWAVLFLGAGFIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SHFQFTFASSSFSLDDLGRRTWLTLPFWPSWFLGLLLTAVIWWHTFRRLRMTDDSH
HHHHHHHCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQTKFLKLPVYQQGLFLTLIWLMVGIGVMLYRWPTSDQDFQTTPYWLAPNLIHMQGEVTA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCEEEECCCCCH
QWFPFACAVTAGVSLYVVKHIKSRNCDTREGLYVLQNLWPIWLVTIVVFFLLNLWLPQTG
HHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MTRFSSFDRQVLTIAILFLDITLFSSYMLWLNFWVPVGRVHNVIKVLFWAVLFLGAGFIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SHFQFTFASSSFSLDDLGRRTWLTLPFWPSWFLGLLLTAVIWWHTFRRLRMTDDSH
HHHHHHHCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA