Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116494167

Identifier: 116494167

GI number: 116494167

Start: 606591

End: 608612

Strand: Direct

Name: 116494167

Synonym: LSEI_0617

Alternate gene names: NA

Gene position: 606591-608612 (Clockwise)

Preceding gene: 116494166

Following gene: 116494176

Centisome position: 20.95

GC content: 49.16

Gene sequence:

>2022_bases
ATGAAAAAACGATGCTATCTGTTAGCTTGTCTCGGCATGCTGTTGTGTACCCTGCTGGCGCCTGTGACGAGTGTTGGCGC
GGCCGTCACGTGGCCGACGACTTCCGGCTATCCAGCACCGCCGTCATTTGGTGACGTGGACGGCCTCTTTTCACCAACGA
TGGGTGACTCAAGTTTATTGACGGATCCGACCAGCGGACATGCAGTCGGGCTTGAGATTAACAAGGATCAAGCAAATCGG
TCAGGAGCAATTTGGAGCAAGGCCCCAATGTTTGATTTGGATAAGGATAGTTCGTATACGATGTACTTTTATATGGGAAA
CAAGCCAAAAAGTGGTGAAGGCATGGGCTTTGTTCTTGCTGCGAAACCAGCGGCGCCGAAAAAGATTGATACTGGCTCAT
TAGGCGTTTGGGGGGTGGATCATCTTCCTCCTAATAGCAAGCCACAAGAAGTCGCCGATACAGCGTTACCCAATAGTTTT
GCAATGGTGGTGGATACACGAAAAAATGGTACAGGAGATCCGGGTGGTTATGAACAACTGAGTGATTTTCAGTCTTATTA
CTTTGGTACTGGTTATCCGGGACAAGCAAATATGTATCGGATCGACTATCCTTATTGGATGACTTGGCTGTATTTTAAGA
TCAACAATCCATCTGAACAATACCGCTTTGGACTTGGAACACAGAAGAATTTGTATGAAACGCCAGCCAATGGCAAATGG
CATAAACTACAACTTGATTGGAAAAAAGATAATCTCGGTGGCGGTACATTAACGGCACAAATGACGATTACTCGCGCGAG
TAAGCCAGACTACGCCACAGAGGTCATCAAGTGGACCAAAAATGATATTCAAAAATACTTTTCTCAAGGTTCAACCGATC
CCGCGCCGAGAAAATTGTATCTAGGGTTTACCGGGACGACAAGTGACGTTTTCGAACCGCATGTCGTCGCAATCGGCGCC
ATGCCTGAAGCCGCGACCGTGAATGGTACAGTCGCCTTGATGCGCGGAGCGGAAACGGTGGATGCCACCACCCATCTAAA
AGTGGACGATGTGCTGCACTATGATTACACCGTGAACGTGAAGGCAACCAGTCAGGCACCCTGGCCGGAAAGCGGGACAG
CAACGATGAACGTGCCAAAAGGAAAATATTTTGACTATCTGAAGGCTGATGGGACGCCCGCCAAACCGGGCGATACGTTG
CCCATCAAAGTCACGATAGGTAATTCGGATTATCAGGCCCAAGGAAAAGTTCAACCGGATGGCAATCAGATTGCTGTCAC
CAATATGCCCCAGATTCCAAAAGGAGCAACGGCAACGGTGAAGTTTTCACTGCCGGCCAAAGTCAAACATCATGGCCTGC
TGGAAACGACACCGGTTCAGGACAAACCAATTGGGACCATCACAGGGGATGGCCAGACTTATGATCTGAAGACACCTGCG
GGCAAAGATTTTCTCGCTTATATTCTTGATCCCGAAACAGGTGAACTCGTGCTGGAGAAAGTGCCGAGTTTTGTCTTCGA
ATTGAAAAATGGTCAAACCGGTTATCGTAATCCGACCGTGATGGAGATGGTAAAGGGACTGCCAACGCCAACGACCACTA
ATTGGGATCAGGCGAATGCAGATCAGTGGCTGACGAATCAGCAAGGCCGCGAACCGACCAATTCGACAGGCAAGGTGTTG
AGCGTGAAAGATACGCGGCCAACCAAGCAAGGCTGGCATTTGACGATGCAACTATCGCCTTTTACATTAACTGATAATAG
CTATGTGCTAGGCGATAATGGGAACAAATTAGGCGGCAAGGCAAGGTTGGTTCTGACAGATCAGACAGCGCAAATTGCGG
CTATCAAGGATAATAACAACGCGACACCGGTGAAAAATATGGCGGCTGGTGGGACAGATTGGTCGCTAGGCACTCAAACC
GGTAATGTAGCGGCCTACCTAGGCATTGAACCAACAGCGACTGCTAAGGCTGGCCAATATCAGGCCACGGCTACTTGGTT
GTTGACGAATGCGCCGGAATAG

Upstream 100 bases:

>100_bases
CTGAAGTCTGTAGCGAAAAAATACGGTGCAATTGAACTTCAAGTGCGCTTAGGGGTAATGGCACCTTGCAACCGGACTAC
TTGCGAAAGGAGGCGTTCTG

Downstream 100 bases:

>100_bases
TAAGGCGCTGGAGGTGCACCAAAAAATGGTTCCGAAACATAAGGCTGACTTATGTTTCGGAACCATTTTTACTTAGCTAT
GATTTAGTTTTCTGTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 673; Mature: 673

Protein sequence:

>673_residues
MKKRCYLLACLGMLLCTLLAPVTSVGAAVTWPTTSGYPAPPSFGDVDGLFSPTMGDSSLLTDPTSGHAVGLEINKDQANR
SGAIWSKAPMFDLDKDSSYTMYFYMGNKPKSGEGMGFVLAAKPAAPKKIDTGSLGVWGVDHLPPNSKPQEVADTALPNSF
AMVVDTRKNGTGDPGGYEQLSDFQSYYFGTGYPGQANMYRIDYPYWMTWLYFKINNPSEQYRFGLGTQKNLYETPANGKW
HKLQLDWKKDNLGGGTLTAQMTITRASKPDYATEVIKWTKNDIQKYFSQGSTDPAPRKLYLGFTGTTSDVFEPHVVAIGA
MPEAATVNGTVALMRGAETVDATTHLKVDDVLHYDYTVNVKATSQAPWPESGTATMNVPKGKYFDYLKADGTPAKPGDTL
PIKVTIGNSDYQAQGKVQPDGNQIAVTNMPQIPKGATATVKFSLPAKVKHHGLLETTPVQDKPIGTITGDGQTYDLKTPA
GKDFLAYILDPETGELVLEKVPSFVFELKNGQTGYRNPTVMEMVKGLPTPTTTNWDQANADQWLTNQQGREPTNSTGKVL
SVKDTRPTKQGWHLTMQLSPFTLTDNSYVLGDNGNKLGGKARLVLTDQTAQIAAIKDNNNATPVKNMAAGGTDWSLGTQT
GNVAAYLGIEPTATAKAGQYQATATWLLTNAPE

Sequences:

>Translated_673_residues
MKKRCYLLACLGMLLCTLLAPVTSVGAAVTWPTTSGYPAPPSFGDVDGLFSPTMGDSSLLTDPTSGHAVGLEINKDQANR
SGAIWSKAPMFDLDKDSSYTMYFYMGNKPKSGEGMGFVLAAKPAAPKKIDTGSLGVWGVDHLPPNSKPQEVADTALPNSF
AMVVDTRKNGTGDPGGYEQLSDFQSYYFGTGYPGQANMYRIDYPYWMTWLYFKINNPSEQYRFGLGTQKNLYETPANGKW
HKLQLDWKKDNLGGGTLTAQMTITRASKPDYATEVIKWTKNDIQKYFSQGSTDPAPRKLYLGFTGTTSDVFEPHVVAIGA
MPEAATVNGTVALMRGAETVDATTHLKVDDVLHYDYTVNVKATSQAPWPESGTATMNVPKGKYFDYLKADGTPAKPGDTL
PIKVTIGNSDYQAQGKVQPDGNQIAVTNMPQIPKGATATVKFSLPAKVKHHGLLETTPVQDKPIGTITGDGQTYDLKTPA
GKDFLAYILDPETGELVLEKVPSFVFELKNGQTGYRNPTVMEMVKGLPTPTTTNWDQANADQWLTNQQGREPTNSTGKVL
SVKDTRPTKQGWHLTMQLSPFTLTDNSYVLGDNGNKLGGKARLVLTDQTAQIAAIKDNNNATPVKNMAAGGTDWSLGTQT
GNVAAYLGIEPTATAKAGQYQATATWLLTNAPE
>Mature_673_residues
MKKRCYLLACLGMLLCTLLAPVTSVGAAVTWPTTSGYPAPPSFGDVDGLFSPTMGDSSLLTDPTSGHAVGLEINKDQANR
SGAIWSKAPMFDLDKDSSYTMYFYMGNKPKSGEGMGFVLAAKPAAPKKIDTGSLGVWGVDHLPPNSKPQEVADTALPNSF
AMVVDTRKNGTGDPGGYEQLSDFQSYYFGTGYPGQANMYRIDYPYWMTWLYFKINNPSEQYRFGLGTQKNLYETPANGKW
HKLQLDWKKDNLGGGTLTAQMTITRASKPDYATEVIKWTKNDIQKYFSQGSTDPAPRKLYLGFTGTTSDVFEPHVVAIGA
MPEAATVNGTVALMRGAETVDATTHLKVDDVLHYDYTVNVKATSQAPWPESGTATMNVPKGKYFDYLKADGTPAKPGDTL
PIKVTIGNSDYQAQGKVQPDGNQIAVTNMPQIPKGATATVKFSLPAKVKHHGLLETTPVQDKPIGTITGDGQTYDLKTPA
GKDFLAYILDPETGELVLEKVPSFVFELKNGQTGYRNPTVMEMVKGLPTPTTTNWDQANADQWLTNQQGREPTNSTGKVL
SVKDTRPTKQGWHLTMQLSPFTLTDNSYVLGDNGNKLGGKARLVLTDQTAQIAAIKDNNNATPVKNMAAGGTDWSLGTQT
GNVAAYLGIEPTATAKAGQYQATATWLLTNAPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72812; Mature: 72812

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRCYLLACLGMLLCTLLAPVTSVGAAVTWPTTSGYPAPPSFGDVDGLFSPTMGDSSLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TDPTSGHAVGLEINKDQANRSGAIWSKAPMFDLDKDSSYTMYFYMGNKPKSGEGMGFVLA
CCCCCCCEEEEEECCCCCCCCCCEECCCCCEECCCCCCEEEEEEECCCCCCCCCCEEEEE
AKPAAPKKIDTGSLGVWGVDHLPPNSKPQEVADTALPNSFAMVVDTRKNGTGDPGGYEQL
ECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHH
SDFQSYYFGTGYPGQANMYRIDYPYWMTWLYFKINNPSEQYRFGLGTQKNLYETPANGKW
HHHHHHHCCCCCCCCCCEEEEECCEEEEEEEEEECCCCHHEEECCCCCCCEEECCCCCCE
HKLQLDWKKDNLGGGTLTAQMTITRASKPDYATEVIKWTKNDIQKYFSQGSTDPAPRKLY
EEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LGFTGTTSDVFEPHVVAIGAMPEAATVNGTVALMRGAETVDATTHLKVDDVLHYDYTVNV
EEECCCCHHHCCCEEEEEECCCCCEECCCEEEEEECCCCCCCEEEEEEHHEEEEEEEEEE
KATSQAPWPESGTATMNVPKGKYFDYLKADGTPAKPGDTLPIKVTIGNSDYQAQGKVQPD
EECCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEECCEECCC
GNQIAVTNMPQIPKGATATVKFSLPAKVKHHGLLETTPVQDKPIGTITGDGQTYDLKTPA
CCEEEEECCCCCCCCCEEEEEEECCCCHHHCCCEECCCCCCCCCEEEECCCEEEEECCCC
GKDFLAYILDPETGELVLEKVPSFVFELKNGQTGYRNPTVMEMVKGLPTPTTTNWDQANA
CCCEEEEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
DQWLTNQQGREPTNSTGKVLSVKDTRPTKQGWHLTMQLSPFTLTDNSYVLGDNGNKLGGK
HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEECCCCEEECCCCCCCCCE
ARLVLTDQTAQIAAIKDNNNATPVKNMAAGGTDWSLGTQTGNVAAYLGIEPTATAKAGQY
EEEEEECCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE
QATATWLLTNAPE
EEEEEEEEECCCC
>Mature Secondary Structure
MKKRCYLLACLGMLLCTLLAPVTSVGAAVTWPTTSGYPAPPSFGDVDGLFSPTMGDSSLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
TDPTSGHAVGLEINKDQANRSGAIWSKAPMFDLDKDSSYTMYFYMGNKPKSGEGMGFVLA
CCCCCCCEEEEEECCCCCCCCCCEECCCCCEECCCCCCEEEEEEECCCCCCCCCCEEEEE
AKPAAPKKIDTGSLGVWGVDHLPPNSKPQEVADTALPNSFAMVVDTRKNGTGDPGGYEQL
ECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHH
SDFQSYYFGTGYPGQANMYRIDYPYWMTWLYFKINNPSEQYRFGLGTQKNLYETPANGKW
HHHHHHHCCCCCCCCCCEEEEECCEEEEEEEEEECCCCHHEEECCCCCCCEEECCCCCCE
HKLQLDWKKDNLGGGTLTAQMTITRASKPDYATEVIKWTKNDIQKYFSQGSTDPAPRKLY
EEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LGFTGTTSDVFEPHVVAIGAMPEAATVNGTVALMRGAETVDATTHLKVDDVLHYDYTVNV
EEECCCCHHHCCCEEEEEECCCCCEECCCEEEEEECCCCCCCEEEEEEHHEEEEEEEEEE
KATSQAPWPESGTATMNVPKGKYFDYLKADGTPAKPGDTLPIKVTIGNSDYQAQGKVQPD
EECCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEECCEECCC
GNQIAVTNMPQIPKGATATVKFSLPAKVKHHGLLETTPVQDKPIGTITGDGQTYDLKTPA
CCEEEEECCCCCCCCCEEEEEEECCCCHHHCCCEECCCCCCCCCEEEECCCEEEEECCCC
GKDFLAYILDPETGELVLEKVPSFVFELKNGQTGYRNPTVMEMVKGLPTPTTTNWDQANA
CCCEEEEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
DQWLTNQQGREPTNSTGKVLSVKDTRPTKQGWHLTMQLSPFTLTDNSYVLGDNGNKLGGK
HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEECCCCEEECCCCCCCCCE
ARLVLTDQTAQIAAIKDNNNATPVKNMAAGGTDWSLGTQTGNVAAYLGIEPTATAKAGQY
EEEEEECCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE
QATATWLLTNAPE
EEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA