| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494165
Identifier: 116494165
GI number: 116494165
Start: 605385
End: 605744
Strand: Direct
Name: 116494165
Synonym: LSEI_0615
Alternate gene names: NA
Gene position: 605385-605744 (Clockwise)
Preceding gene: 116494164
Following gene: 116494166
Centisome position: 20.91
GC content: 50.56
Gene sequence:
>360_bases ATGACACGAAGTATATGGCGCTTTTTGATCAGTTTGATCATTGTGTTCGGCGTCCTCGGTGAAGGGATCATGGCCGCTCA CCAAGTGCGAGCGGCAACCTCCATCGGTGAAGTCGTCGTGATTGACGATCGGCCAAAACCCGACAAGGATCATAATGCAC CAGGAACAGAAGTATCAAAACCAAAGGAAGAGCCTTCGGTACCGCCACGCCAACAGGTTGATCGTTTGCCACAGACCAGC GAAGGCGGACAAACCTGGTATCCGCTGATCGGTTTTGCACTCCTGATGATGAGCAGTTTGCGTCTTCAACTGTGGTTTAA ACGAAAAGACAGGGGGGACGATGATGAAAATCGTGACTAA
Upstream 100 bases:
>100_bases TGAAGAAAAGCGTTTTGGGTCAGTTATGGGTGATGCGATACTACTGAGTTAATCAGATGAAGTTCTCGGAATGACAAACG TAGGGAAAAGGGGGAGACCG
Downstream 100 bases:
>100_bases TTTCGCCATCGCTTTTGTCACCCTGATGCTTGCAGGTTTCGTCGGGCCGCACCAGTCAGTTATGGCCGCAGATGATCTAG GCCCAAAAAAGTCCAGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTRSIWRFLISLIIVFGVLGEGIMAAHQVRAATSIGEVVVIDDRPKPDKDHNAPGTEVSKPKEEPSVPPRQQVDRLPQTS EGGQTWYPLIGFALLMMSSLRLQLWFKRKDRGDDDENRD
Sequences:
>Translated_119_residues MTRSIWRFLISLIIVFGVLGEGIMAAHQVRAATSIGEVVVIDDRPKPDKDHNAPGTEVSKPKEEPSVPPRQQVDRLPQTS EGGQTWYPLIGFALLMMSSLRLQLWFKRKDRGDDDENRD >Mature_118_residues TRSIWRFLISLIIVFGVLGEGIMAAHQVRAATSIGEVVVIDDRPKPDKDHNAPGTEVSKPKEEPSVPPRQQVDRLPQTSE GGQTWYPLIGFALLMMSSLRLQLWFKRKDRGDDDENRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13456; Mature: 13324
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSIWRFLISLIIVFGVLGEGIMAAHQVRAATSIGEVVVIDDRPKPDKDHNAPGTEVSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC PKEEPSVPPRQQVDRLPQTSEGGQTWYPLIGFALLMMSSLRLQLWFKRKDRGDDDENRD CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TRSIWRFLISLIIVFGVLGEGIMAAHQVRAATSIGEVVVIDDRPKPDKDHNAPGTEVSK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC PKEEPSVPPRQQVDRLPQTSEGGQTWYPLIGFALLMMSSLRLQLWFKRKDRGDDDENRD CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA