Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494104

Identifier: 116494104

GI number: 116494104

Start: 541811

End: 542059

Strand: Direct

Name: 116494104

Synonym: LSEI_0547

Alternate gene names: NA

Gene position: 541811-542059 (Clockwise)

Preceding gene: 116494103

Following gene: 116494105

Centisome position: 18.71

GC content: 52.21

Gene sequence:

>249_bases
ATGATGCCAGCTATTTATGCAGATGAAATGCAAGCGCTCGGCAGTGAGTTGCCTGTGATTGACAACCTCGCCGATTATCC
AACCGTCAGCTTGCAACCAACGTCCACCAAAATGAGACGGGTTGCTTGGCAGCAGGTTGCCGACAATCAGTATCGAGCGT
TATACGCTTTGGAGCCGATCATCAAACCGGTTCCTGGTGCGGAAGAGAACGTCACATGGGAGGAGGACGGTGAAGATGGC
GAGGACTAA

Upstream 100 bases:

>100_bases
ATCAGGATCGAGAACGTGAACAAGACAAGAAGAAACAGGAACAGCAGACGCGCTTTTACTAGGGCGTTTTTTGTTTGTCT
TCTATATAGAAAGGAAAGTA

Downstream 100 bases:

>100_bases
AGCTGAGATCAAAGCCTGGGAACATGAGATGGCGCAGCGAGCCACAGAACAATTAAGTGCACTTGCTGATACCCAAAAGT
TTAAACAATACCTTCGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MMPAIYADEMQALGSELPVIDNLADYPTVSLQPTSTKMRRVAWQQVADNQYRALYALEPIIKPVPGAEENVTWEEDGEDG
ED

Sequences:

>Translated_82_residues
MMPAIYADEMQALGSELPVIDNLADYPTVSLQPTSTKMRRVAWQQVADNQYRALYALEPIIKPVPGAEENVTWEEDGEDG
ED
>Mature_82_residues
MMPAIYADEMQALGSELPVIDNLADYPTVSLQPTSTKMRRVAWQQVADNQYRALYALEPIIKPVPGAEENVTWEEDGEDG
ED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9183; Mature: 9183

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPAIYADEMQALGSELPVIDNLADYPTVSLQPTSTKMRRVAWQQVADNQYRALYALEPI
CCCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
IKPVPGAEENVTWEEDGEDGED
HCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMPAIYADEMQALGSELPVIDNLADYPTVSLQPTSTKMRRVAWQQVADNQYRALYALEPI
CCCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
IKPVPGAEENVTWEEDGEDGED
HCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA