Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494093

Identifier: 116494093

GI number: 116494093

Start: 533320

End: 533655

Strand: Direct

Name: 116494093

Synonym: LSEI_0536

Alternate gene names: NA

Gene position: 533320-533655 (Clockwise)

Preceding gene: 116494092

Following gene: 116494094

Centisome position: 18.42

GC content: 44.05

Gene sequence:

>336_bases
ATGGCTCATAAGGTGATTTATTCGCGCCGTCTCATTGTCAAAGGACAATACAACAAACTTCTGACCATTCGCGATGTCTT
CATTGCGGGTGCTGTTTCTGGGGTCACTTTCATTGTATTAATTGTGACAACACCCATGGCTGTCGCGCTGTTTGGGTTGA
TTTTAATGTTTGTGCTAACTGCAGCGTTACGAATCCAATCCGGTGTACCACAAAAGAACAACTTGCAGGTCATGAAACAG
TTGTTACTGCGCAAGCGGGTCATTTACCATGCGATTGACGATCCAATTAGACAACTATTATTCAAGCGAGGTGAGCATCG
TGGCAACAAAGTTTGA

Upstream 100 bases:

>100_bases
GCGGTGCTGCCATTCCAAGCAATACACGCCAAGTAATCCAAAGTGCAAAGAACTCATATCAAAATCATAATGAACAGCCA
ACCTTTAGGAGGTGACTTAA

Downstream 100 bases:

>100_bases
CGCTGTTGAAGCACGTAAACGCCAAAAAGAGGCAGCAAAGAAAAAGGAACGCAAGGATGGTGTTGGTCGTATTTATCCGG
TGGTTGGTATCACTAATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAHKVIYSRRLIVKGQYNKLLTIRDVFIAGAVSGVTFIVLIVTTPMAVALFGLILMFVLTAALRIQSGVPQKNNLQVMKQ
LLLRKRVIYHAIDDPIRQLLFKRGEHRGNKV

Sequences:

>Translated_111_residues
MAHKVIYSRRLIVKGQYNKLLTIRDVFIAGAVSGVTFIVLIVTTPMAVALFGLILMFVLTAALRIQSGVPQKNNLQVMKQ
LLLRKRVIYHAIDDPIRQLLFKRGEHRGNKV
>Mature_110_residues
AHKVIYSRRLIVKGQYNKLLTIRDVFIAGAVSGVTFIVLIVTTPMAVALFGLILMFVLTAALRIQSGVPQKNNLQVMKQL
LLRKRVIYHAIDDPIRQLLFKRGEHRGNKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12568; Mature: 12436

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHKVIYSRRLIVKGQYNKLLTIRDVFIAGAVSGVTFIVLIVTTPMAVALFGLILMFVLT
CCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALRIQSGVPQKNNLQVMKQLLLRKRVIYHAIDDPIRQLLFKRGEHRGNKV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AHKVIYSRRLIVKGQYNKLLTIRDVFIAGAVSGVTFIVLIVTTPMAVALFGLILMFVLT
CCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALRIQSGVPQKNNLQVMKQLLLRKRVIYHAIDDPIRQLLFKRGEHRGNKV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA