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The map label for this gene is 116493566

Identifier: 116493566

GI number: 116493566

Start: 1824670

End: 1825068

Strand: Reverse

Name: 116493566

Synonym: PEPE_1840

Alternate gene names: NA

Gene position: 1825068-1824670 (Counterclockwise)

Preceding gene: 116493567

Following gene: 116493565

Centisome position: 99.6

GC content: 40.1

Gene sequence:

>399_bases
ATGAAGCGTGATCCGAATTGTGTTTTTTGCCAGAAAACAAAGGAAGATTATATTGTTGAAAATAAATTAGCAGCGTCATT
TTTAGATTTTTATCCAGTTAGTAAGGGACATACTTTAATCGTACCTAAACGGCATGTCCGTCAATTGTGGGAATTAAATG
AAGAGGAAAGACACGCAATTTTTACATTGGTCGAAAAAAATAAGGCGATCTTAGACCAAAAATACCAACCGGATGGATAT
AATGTGGTAGTAAATTCAGGTGCGGCGGCAGGCCAGAGTGTTTTTCACTGTCATATCCATCTCATACCACGCTACTGGAA
TGAAGATCCAAAGCGTAAACCAGTTCCGGGCCAATTCTTAGTACCTCCGGAGCGTCCTCAATTCAAGGGGATGGATTAG

Upstream 100 bases:

>100_bases
TTTTTGTTTGTTTTTATGAAGGTAAGCGCTAAAATTAAATTAACGTACCAGCTAGTAAAAGAGATTGGTAACTTGGAACT
TAATCGTGGAGGAATGAAAA

Downstream 100 bases:

>100_bases
AAAATAAATTAGAAAGCATTCGGTACTTTATAAAGTATCGAATGCTTTATTATTTTAAGAAATAAAAAAACGTCTCACCA
GGGGGGAGAGACGCATATAC

Product: diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKRDPNCVFCQKTKEDYIVENKLAASFLDFYPVSKGHTLIVPKRHVRQLWELNEEERHAIFTLVEKNKAILDQKYQPDGY
NVVVNSGAAAGQSVFHCHIHLIPRYWNEDPKRKPVPGQFLVPPERPQFKGMD

Sequences:

>Translated_132_residues
MKRDPNCVFCQKTKEDYIVENKLAASFLDFYPVSKGHTLIVPKRHVRQLWELNEEERHAIFTLVEKNKAILDQKYQPDGY
NVVVNSGAAAGQSVFHCHIHLIPRYWNEDPKRKPVPGQFLVPPERPQFKGMD
>Mature_132_residues
MKRDPNCVFCQKTKEDYIVENKLAASFLDFYPVSKGHTLIVPKRHVRQLWELNEEERHAIFTLVEKNKAILDQKYQPDGY
NVVVNSGAAAGQSVFHCHIHLIPRYWNEDPKRKPVPGQFLVPPERPQFKGMD

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17556280, Length=78, Percent_Identity=37.1794871794872, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320078, Length=105, Percent_Identity=34.2857142857143, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15373; Mature: 15373

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDPNCVFCQKTKEDYIVENKLAASFLDFYPVSKGHTLIVPKRHVRQLWELNEEERHAI
CCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCCEEE
FTLVEKNKAILDQKYQPDGYNVVVNSGAAAGQSVFHCHIHLIPRYWNEDPKRKPVPGQFL
EEEECCCCHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
VPPERPQFKGMD
CCCCCCCCCCCC
>Mature Secondary Structure
MKRDPNCVFCQKTKEDYIVENKLAASFLDFYPVSKGHTLIVPKRHVRQLWELNEEERHAI
CCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCCEEE
FTLVEKNKAILDQKYQPDGYNVVVNSGAAAGQSVFHCHIHLIPRYWNEDPKRKPVPGQFL
EEEECCCCHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
VPPERPQFKGMD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]