| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493506
Identifier: 116493506
GI number: 116493506
Start: 1753623
End: 1754276
Strand: Reverse
Name: 116493506
Synonym: PEPE_1778
Alternate gene names: NA
Gene position: 1754276-1753623 (Counterclockwise)
Preceding gene: 116493507
Following gene: 116493504
Centisome position: 95.74
GC content: 37.77
Gene sequence:
>654_bases ATGGAAGTCAAACAGGCAATTCAAAAGCGTCATTCCGTACGTCATTTTACGGATCAAAAAATAGATTCAAAACAATTAAA AGAAATGATTGGAATTGCTCAAAAAGCACCTTCATGGGTCAATTCGCAACCGCAAAAAGTTTATGTAGCCCAAGGTGAGA CTTTGGAAGCTATTAGAAAGCAACAACAGGAATTGGCAATTACAGGAGCAAAAACTAATTCGGATATTCCTCCAATGTCG CGGAAGCGCTGGTCCGAACAAGCTCAAAAGAACATGGCTGAATGGAGCCATGGCATACCAGCAGTTTTGGGAGATAATTG GCAAGAAACTTTGGGTAAAGAAGCCAGTCAGCTTTATAATGCTCAAGCTGTAGTTTATTTGACCTTACCAAAAGGATATA CACCATGGTCTTTGTTTGATTTAGGTGCATTTAGTCAAAATATTTTGTTGGCCACGACTGAACAAGGTATTGACTCGATC GTCGCATATAACTTTGTGAAGTATCCGCAGATTTTAAGAGAGGAGTTAAATATTCCAAGTGATGAGGAAATTATCGTTGG GATTGGCTTAGGATTTGAAGATGAACAGGCACAAGTAAACCGCATAACTTCTAAACGAATGGATACAGAATCTATTTTAA AAATTAAAAAATAA
Upstream 100 bases:
>100_bases AACTTTTTCAACTCTTGACTTAAAGTAAACTTTAAGTCGTATACTAAAACCTGCAGTATGGTTCTAAATTTGCAATAAAC GATTCGGAGGTTTAGACAGG
Downstream 100 bases:
>100_bases AAAAAGCGTTCAGAAAATTTTTTCTGAACGCTTTTTTTATTCAAGTAAATTGACATCCGCAGATACTGCGCTAGATCGGT ATGGAAAACGAGATTCAGAA
Product: p-nitrobenzoate reductase
Products: NA
Alternate protein names: P-Nitrobenzoate Reductase; Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; Oxygen-Insensitive NAD(P)H Nitroreductase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; NADH Dehydrogenase; LOW QUALITY PROTEIN P-Nitrobenzoate Reductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MEVKQAIQKRHSVRHFTDQKIDSKQLKEMIGIAQKAPSWVNSQPQKVYVAQGETLEAIRKQQQELAITGAKTNSDIPPMS RKRWSEQAQKNMAEWSHGIPAVLGDNWQETLGKEASQLYNAQAVVYLTLPKGYTPWSLFDLGAFSQNILLATTEQGIDSI VAYNFVKYPQILREELNIPSDEEIIVGIGLGFEDEQAQVNRITSKRMDTESILKIKK
Sequences:
>Translated_217_residues MEVKQAIQKRHSVRHFTDQKIDSKQLKEMIGIAQKAPSWVNSQPQKVYVAQGETLEAIRKQQQELAITGAKTNSDIPPMS RKRWSEQAQKNMAEWSHGIPAVLGDNWQETLGKEASQLYNAQAVVYLTLPKGYTPWSLFDLGAFSQNILLATTEQGIDSI VAYNFVKYPQILREELNIPSDEEIIVGIGLGFEDEQAQVNRITSKRMDTESILKIKK >Mature_217_residues MEVKQAIQKRHSVRHFTDQKIDSKQLKEMIGIAQKAPSWVNSQPQKVYVAQGETLEAIRKQQQELAITGAKTNSDIPPMS RKRWSEQAQKNMAEWSHGIPAVLGDNWQETLGKEASQLYNAQAVVYLTLPKGYTPWSLFDLGAFSQNILLATTEQGIDSI VAYNFVKYPQILREELNIPSDEEIIVGIGLGFEDEQAQVNRITSKRMDTESILKIKK
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24572; Mature: 24572
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKQAIQKRHSVRHFTDQKIDSKQLKEMIGIAQKAPSWVNSQPQKVYVAQGETLEAIRK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH QQQELAITGAKTNSDIPPMSRKRWSEQAQKNMAEWSHGIPAVLGDNWQETLGKEASQLYN HHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHC AQAVVYLTLPKGYTPWSLFDLGAFSQNILLATTEQGIDSIVAYNFVKYPQILREELNIPS CCEEEEEEECCCCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCC DEEIIVGIGLGFEDEQAQVNRITSKRMDTESILKIKK CCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MEVKQAIQKRHSVRHFTDQKIDSKQLKEMIGIAQKAPSWVNSQPQKVYVAQGETLEAIRK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH QQQELAITGAKTNSDIPPMSRKRWSEQAQKNMAEWSHGIPAVLGDNWQETLGKEASQLYN HHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHC AQAVVYLTLPKGYTPWSLFDLGAFSQNILLATTEQGIDSIVAYNFVKYPQILREELNIPS CCEEEEEEECCCCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCC DEEIIVGIGLGFEDEQAQVNRITSKRMDTESILKIKK CCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA