Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116493479
Identifier: 116493479
GI number: 116493479
Start: 1726736
End: 1726945
Strand: Reverse
Name: 116493479
Synonym: PEPE_1751
Alternate gene names: NA
Gene position: 1726945-1726736 (Counterclockwise)
Preceding gene: 116493482
Following gene: 116493478
Centisome position: 94.25
GC content: 38.1
Gene sequence:
>210_bases ATGGTTAAAACTTGGTTGAAAACAGGAATCAGTATCACAATGGAAGGCCCAGATCATGAAAAAGGGGTTCGAAGAGCTTT TTCAAACGTGGCGCAAACAGTCACTGCCGAACAAGTAACGGAACTAGCTAAAACACTTGAAATGGTGTCTACTGATAATG TAACTGATGCTCAAATTACAACAACTGAAAAAGTTATCCTAGAAAAGTAA
Upstream 100 bases:
>100_bases ATTTAATAGATTTAGTTTACATTTTTAATTTTGATTCGTTATTAGTAAGTGTAAGTCGTCGCGACACTTATATTAAATGA TAAGAAATGAGGATGAAAAC
Downstream 100 bases:
>100_bases TCAAAACTAAATAAACCAATTGGCATTCATATATCAAGCTTAAAAATTTTGGAGGAGTAACTATGAAACTATTAGACTTA GAATTTACTAATGCAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MVKTWLKTGISITMEGPDHEKGVRRAFSNVAQTVTAEQVTELAKTLEMVSTDNVTDAQITTTEKVILEK
Sequences:
>Translated_69_residues MVKTWLKTGISITMEGPDHEKGVRRAFSNVAQTVTAEQVTELAKTLEMVSTDNVTDAQITTTEKVILEK >Mature_69_residues MVKTWLKTGISITMEGPDHEKGVRRAFSNVAQTVTAEQVTELAKTLEMVSTDNVTDAQITTTEKVILEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7622; Mature: 7622
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKTWLKTGISITMEGPDHEKGVRRAFSNVAQTVTAEQVTELAKTLEMVSTDNVTDAQIT CCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEC TTEKVILEK CHHHHEECC >Mature Secondary Structure MVKTWLKTGISITMEGPDHEKGVRRAFSNVAQTVTAEQVTELAKTLEMVSTDNVTDAQIT CCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEC TTEKVILEK CHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA