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The map label for this gene is ygaZ [H]

Identifier: 116493442

GI number: 116493442

Start: 1690614

End: 1691402

Strand: Reverse

Name: ygaZ [H]

Synonym: PEPE_1714

Alternate gene names: 116493442

Gene position: 1691402-1690614 (Counterclockwise)

Preceding gene: 116493443

Following gene: 116493441

Centisome position: 92.31

GC content: 37.52

Gene sequence:

>789_bases
TTGAAACAAATTAAAACGGAGGCGCGCTGGAAAGAAACATTTAAAGTAGCGTGGCCACTTTGTTTAAGTTACACGCCGAT
TGGGCTAGCATGTGGAATTCTATTACATGCTGCTGGTTTCAATACGTTACTCACTGGATTAGTTTCCTTAGTTATTTTTT
CAGGTGGGGCCCAATTTTTGATTGCGCAAATGTTAACAGTTAACGCTCCTATCCTGACGATTGTTTTGATGCTCTTCTTC
CTAGAGTTAAGATACGCATTGCTAGGTTCAAGTTTATCGAAATATCTACAAGGTGAGAGTCGTAGTTCGATTTTTACATT
TGCTCTTTCCTTGAATGACGAAAACTACGCTGTAAACTATTTAAAATTTGCAACAGATAAACACTGGACCCCTAATGATG
CTCGCCAAGTTGAGCACTGGTCACTCCTTTTTTGGACCGTTTCTAATATTGTGGGTTCATTGATTGGTAGTGTGCTTAGT
ATTAATCTAACTGTAGTTGATTTTGCTTTGACCGCCTTATTTATCTATATGATTGTGATGCAAATTAAATCTCGACTTTC
ATTGCTGATTTGTATCTTTTCAGGTGCCCTTGCTGCAGTATGTATGATTATAACTAAGAGTACCTTAGGTCTCGTGGCAT
CAACTTTGATCGCGTCATTTACTGGATTTTTAATCGAAGAGTTACTAGTAAAAAAACGACCAGCGAGTGCATTATTACAA
GATATTGGTTCACGTAAAGGTGGTCCAATCATCGAAGAAATCGAAAAAAAAGAGTCAGATATTCTTTAA

Upstream 100 bases:

>100_bases
TTTACTATTAAAATTTTATTTAGCGTGTTAGAATTAATTCGTATGCTTTGCAAAAAATTAATGTATTCTTTTTATATCTA
GTTTTTTTGGAGGACAAACT

Downstream 100 bases:

>100_bases
TTTGGTAGGAGAAATCACGCATGGAGTACAGTTCATTAGATCATCTATTGATTATTATTCTCGGTTTCTTTGTGGCGTTT
GCTCCACGTTATTTACCACT

Product: branched-chain amino acid permease (azaleucine resistance)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKQIKTEARWKETFKVAWPLCLSYTPIGLACGILLHAAGFNTLLTGLVSLVIFSGGAQFLIAQMLTVNAPILTIVLMLFF
LELRYALLGSSLSKYLQGESRSSIFTFALSLNDENYAVNYLKFATDKHWTPNDARQVEHWSLLFWTVSNIVGSLIGSVLS
INLTVVDFALTALFIYMIVMQIKSRLSLLICIFSGALAAVCMIITKSTLGLVASTLIASFTGFLIEELLVKKRPASALLQ
DIGSRKGGPIIEEIEKKESDIL

Sequences:

>Translated_262_residues
MKQIKTEARWKETFKVAWPLCLSYTPIGLACGILLHAAGFNTLLTGLVSLVIFSGGAQFLIAQMLTVNAPILTIVLMLFF
LELRYALLGSSLSKYLQGESRSSIFTFALSLNDENYAVNYLKFATDKHWTPNDARQVEHWSLLFWTVSNIVGSLIGSVLS
INLTVVDFALTALFIYMIVMQIKSRLSLLICIFSGALAAVCMIITKSTLGLVASTLIASFTGFLIEELLVKKRPASALLQ
DIGSRKGGPIIEEIEKKESDIL
>Mature_262_residues
MKQIKTEARWKETFKVAWPLCLSYTPIGLACGILLHAAGFNTLLTGLVSLVIFSGGAQFLIAQMLTVNAPILTIVLMLFF
LELRYALLGSSLSKYLQGESRSSIFTFALSLNDENYAVNYLKFATDKHWTPNDARQVEHWSLLFWTVSNIVGSLIGSVLS
INLTVVDFALTALFIYMIVMQIKSRLSLLICIFSGALAAVCMIITKSTLGLVASTLIASFTGFLIEELLVKKRPASALLQ
DIGSRKGGPIIEEIEKKESDIL

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=203, Percent_Identity=27.5862068965517, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 28834; Mature: 28834

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIKTEARWKETFKVAWPLCLSYTPIGLACGILLHAAGFNTLLTGLVSLVIFSGGAQFL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH
IAQMLTVNAPILTIVLMLFFLELRYALLGSSLSKYLQGESRSSIFTFALSLNDENYAVNY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHH
LKFATDKHWTPNDARQVEHWSLLFWTVSNIVGSLIGSVLSINLTVVDFALTALFIYMIVM
HEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIKSRLSLLICIFSGALAAVCMIITKSTLGLVASTLIASFTGFLIEELLVKKRPASALLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DIGSRKGGPIIEEIEKKESDIL
HHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKQIKTEARWKETFKVAWPLCLSYTPIGLACGILLHAAGFNTLLTGLVSLVIFSGGAQFL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH
IAQMLTVNAPILTIVLMLFFLELRYALLGSSLSKYLQGESRSSIFTFALSLNDENYAVNY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHH
LKFATDKHWTPNDARQVEHWSLLFWTVSNIVGSLIGSVLSINLTVVDFALTALFIYMIVM
HEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIKSRLSLLICIFSGALAAVCMIITKSTLGLVASTLIASFTGFLIEELLVKKRPASALLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DIGSRKGGPIIEEIEKKESDIL
HHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]