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The map label for this gene is yhfK [H]

Identifier: 116493436

GI number: 116493436

Start: 1685496

End: 1686128

Strand: Reverse

Name: yhfK [H]

Synonym: PEPE_1708

Alternate gene names: 116493436

Gene position: 1686128-1685496 (Counterclockwise)

Preceding gene: 116493437

Following gene: 116493435

Centisome position: 92.02

GC content: 37.91

Gene sequence:

>633_bases
ATGAAAATTTTTGTAGTTGGTTCAACTGGTCGAGTTGCAGAGCATCTAATTAAGGATTTAGTTAGCGATGGTCATGAAGT
AGTAGCTGGGGCCAGAAAGATTGAACGGGTAATTGAGTTAGAACATGTTACTCCAGTGCATTTTGATTTACATGATGATG
TAGATGAAATGACCCAAAGCATTAAGGATGTGGATGCAGTTTATTTCGTAGCGGGTTCCCGGGGGAAGGATCTTTTGCAG
ACAGATGCCTTTGGAGCAGTAAAAGTTATGCAAGCTGCAGAAAAAAATGGAATTAAACGATTTATCATGCTCAGCTCAAT
GTTTTCATTAGAACCCCAGGAATGGCATCGGGAAGGATTAGCAGATTTAACTGATTATAATATCGCTAAATTCTTTGCCG
ATAATTATTTAATTTCTAATACCAAATTAGATTACACTATCTTACAACCTGCTAGTCTTACCGAAGAAGAAGGTACCGGA
AAAGTATCCATCAATGGTAGTGGCAAGCAAAATGCTATTTCAAACGTTGCTCAGGTTTTGGCAGCCTTACTTAAACATGA
TAATACAATCAAAAAAGTTATCCGGATGAGTGATGGTGACCAAAATATTGACGACGCACTAACGGAACTTTAA

Upstream 100 bases:

>100_bases
ATCCAGTTGATAAAGCTTGAGAAGATAAGTCGTCTCTCCAACGCATTATTCGTATCTTTTGTATAATGGCAGTAGATTAA
GTTAATAATGGAGGCGGAAT

Downstream 100 bases:

>100_bases
TTAACAAATTTACAAAATAAATAGGGTTACGACGTATTTAAATATGTCGTAACCCTATTTTTATTGAATCAGGATGTAGA
TAGTCTAAATCACTTCATTC

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKIFVVGSTGRVAEHLIKDLVSDGHEVVAGARKIERVIELEHVTPVHFDLHDDVDEMTQSIKDVDAVYFVAGSRGKDLLQ
TDAFGAVKVMQAAEKNGIKRFIMLSSMFSLEPQEWHREGLADLTDYNIAKFFADNYLISNTKLDYTILQPASLTEEEGTG
KVSINGSGKQNAISNVAQVLAALLKHDNTIKKVIRMSDGDQNIDDALTEL

Sequences:

>Translated_210_residues
MKIFVVGSTGRVAEHLIKDLVSDGHEVVAGARKIERVIELEHVTPVHFDLHDDVDEMTQSIKDVDAVYFVAGSRGKDLLQ
TDAFGAVKVMQAAEKNGIKRFIMLSSMFSLEPQEWHREGLADLTDYNIAKFFADNYLISNTKLDYTILQPASLTEEEGTG
KVSINGSGKQNAISNVAQVLAALLKHDNTIKKVIRMSDGDQNIDDALTEL
>Mature_210_residues
MKIFVVGSTGRVAEHLIKDLVSDGHEVVAGARKIERVIELEHVTPVHFDLHDDVDEMTQSIKDVDAVYFVAGSRGKDLLQ
TDAFGAVKVMQAAEKNGIKRFIMLSSMFSLEPQEWHREGLADLTDYNIAKFFADNYLISNTKLDYTILQPASLTEEEGTG
KVSINGSGKQNAISNVAQVLAALLKHDNTIKKVIRMSDGDQNIDDALTEL

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=229, Percent_Identity=33.1877729257642, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23189; Mature: 23189

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFVVGSTGRVAEHLIKDLVSDGHEVVAGARKIERVIELEHVTPVHFDLHDDVDEMTQS
CEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
IKDVDAVYFVAGSRGKDLLQTDAFGAVKVMQAAEKNGIKRFIMLSSMFSLEPQEWHREGL
HHHHHHEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ADLTDYNIAKFFADNYLISNTKLDYTILQPASLTEEEGTGKVSINGSGKQNAISNVAQVL
HHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
AALLKHDNTIKKVIRMSDGDQNIDDALTEL
HHHHHCCHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MKIFVVGSTGRVAEHLIKDLVSDGHEVVAGARKIERVIELEHVTPVHFDLHDDVDEMTQS
CEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
IKDVDAVYFVAGSRGKDLLQTDAFGAVKVMQAAEKNGIKRFIMLSSMFSLEPQEWHREGL
HHHHHHEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ADLTDYNIAKFFADNYLISNTKLDYTILQPASLTEEEGTGKVSINGSGKQNAISNVAQVL
HHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
AALLKHDNTIKKVIRMSDGDQNIDDALTEL
HHHHHCCHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]