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The map label for this gene is bin3 [H]

Identifier: 116493435

GI number: 116493435

Start: 1684664

End: 1685224

Strand: Reverse

Name: bin3 [H]

Synonym: PEPE_1707

Alternate gene names: 116493435

Gene position: 1685224-1684664 (Counterclockwise)

Preceding gene: 116493436

Following gene: 116493434

Centisome position: 91.97

GC content: 37.25

Gene sequence:

>561_bases
ATGAAATATGGTTATGCTCGGGTAAGTTCGCAGGACCAAAACTTGGCACGTCAACTACAACGTTTAAAAGAAGTTGGAAT
GGATCGTATTTACGAGGAAAAAATATCTGGAGCAATCAATGAACGTCCGGAATTGATGAAGGTTTTAAAACGCCTTAAAC
CGGGCGACGAACTCTACGTTATCGAGATGGAACGTTTAGGAAGAAACAATGAATATCTTACTCACATTTTTATGGAAGTT
TATTTAAAGGGGGCCAAATTAGTTATTTTGGATTTGCCCACTTTTGATGATATTGATGATGCAAACATGCGTAATTTCTT
GAGAAATATTTTTATCGAGACAAAGAAATTCCAGGCAGAGTCGGAAAGAAAGCGAATTCGGATTCGACAACGTCAGGGAA
TCGAATTGGCTAAAAAGCGGGGGGTTTATAAAGGACGTCCAATTCTTTTTGGACCAGATGTTAAAAATCAAGCACGCCGA
AAAACGTATTTTGAAATCGTCGAAATGTTAAATGCTGGTCAAAAAGTTATTTTAACGATAAGCATTTTGAGCTATACTTA
G

Upstream 100 bases:

>100_bases
ATTATACCGCTTAGGCAATATCATATATAATGCAATGCTTTTTTAGGGTACACCCTAAAAAACAGACATTTAGATGTCTA
AAATCTAGGAGGTTTTATTT

Downstream 100 bases:

>100_bases
TTTAGGCGCTGAACTATTCTAGTGATATATTTAAAAATATAAGGTAATTAATTGTTTTTTTAGGGTGTACCTTCAAAATA
CAACTTCATGTGTATTTTGG

Product: site-specific recombinase, DNA invertase Pin related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKYGYARVSSQDQNLARQLQRLKEVGMDRIYEEKISGAINERPELMKVLKRLKPGDELYVIEMERLGRNNEYLTHIFMEV
YLKGAKLVILDLPTFDDIDDANMRNFLRNIFIETKKFQAESERKRIRIRQRQGIELAKKRGVYKGRPILFGPDVKNQARR
KTYFEIVEMLNAGQKVILTISILSYT

Sequences:

>Translated_186_residues
MKYGYARVSSQDQNLARQLQRLKEVGMDRIYEEKISGAINERPELMKVLKRLKPGDELYVIEMERLGRNNEYLTHIFMEV
YLKGAKLVILDLPTFDDIDDANMRNFLRNIFIETKKFQAESERKRIRIRQRQGIELAKKRGVYKGRPILFGPDVKNQARR
KTYFEIVEMLNAGQKVILTISILSYT
>Mature_186_residues
MKYGYARVSSQDQNLARQLQRLKEVGMDRIYEEKISGAINERPELMKVLKRLKPGDELYVIEMERLGRNNEYLTHIFMEV
YLKGAKLVILDLPTFDDIDDANMRNFLRNIFIETKKFQAESERKRIRIRQRQGIELAKKRGVYKGRPILFGPDVKNQARR
KTYFEIVEMLNAGQKVILTISILSYT

Specific function: Potential DNA invertase [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=161, Percent_Identity=36.6459627329193, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 21948; Mature: 21948

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGYARVSSQDQNLARQLQRLKEVGMDRIYEEKISGAINERPELMKVLKRLKPGDELYV
CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEE
IEMERLGRNNEYLTHIFMEVYLKGAKLVILDLPTFDDIDDANMRNFLRNIFIETKKFQAE
EEHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SERKRIRIRQRQGIELAKKRGVYKGRPILFGPDVKNQARRKTYFEIVEMLNAGQKVILTI
HHHHHHHHHHHCCHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
SILSYT
EEEECC
>Mature Secondary Structure
MKYGYARVSSQDQNLARQLQRLKEVGMDRIYEEKISGAINERPELMKVLKRLKPGDELYV
CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEE
IEMERLGRNNEYLTHIFMEVYLKGAKLVILDLPTFDDIDDANMRNFLRNIFIETKKFQAE
EEHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SERKRIRIRQRQGIELAKKRGVYKGRPILFGPDVKNQARRKTYFEIVEMLNAGQKVILTI
HHHHHHHHHHHCCHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
SILSYT
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2555186 [H]