Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493432

Identifier: 116493432

GI number: 116493432

Start: 1681741

End: 1682838

Strand: Reverse

Name: 116493432

Synonym: PEPE_1704

Alternate gene names: NA

Gene position: 1682838-1681741 (Counterclockwise)

Preceding gene: 116493434

Following gene: 116493431

Centisome position: 91.84

GC content: 36.16

Gene sequence:

>1098_bases
ATGAAAAAATATGGAATTTTGATTCCAGCTTTAAATCCGGACCAAAAGTTAATTAAATTGGTCCATGAATTATTAAATAA
TGTGATTAATTTTGATGCGCTAGTATTGGTTGATGATGGCAGTGCGGTCACGAACCAAGCTGTTTTTAAAGAACTTGAGG
AAATTGGAGATCAGCGAATTCATGTTTTACATCATCAACATAATGAAGGAAAAGGCGCGGCGTTGAAAAATGGTTTCCGT
TATATCCGCAACTATTTTCCAGAAATCGAAGGGATTGCGACAATGGATTCAGACGGACAACATACCGTGGGAGCTTTAAG
CTCATGTATGGAGAAGTTCGAAGAAAATCCCACAGACTTGATTATTGGAGTTCGCAAATTTACTAACGAAATTCCCGCAC
GAAGTCAATTCGGAAATGTCTTAACAAGTAAATTAGTGAAGTTGTTAACTCACCAGAATATCTCAGATACACAAACAGGT
CTAAGAATTATTCCTCACCAATATGTAGATCAGTTAATTGAATTTCCTGGAGACCGTTTTGAGTTCGAATTTGATATGTT
GCTTCAGGCGCGTAAATACGATGTAAAAGTGATTGAGCAATCCATTCCAACCATTTATTTGGATGGTAATAAGTCATCTC
ATTTTCGAGTGGTTCGAGACTCGCTTGCAATCTATGCCCGTTTCTTTAAATTTGCAGGGAGCGGAATTATTTCTTTTATT
GTTGATATTGCGCTTTTTGAAGGAATTATCCTACTAATGGGAAACCATGTGTTAGATAGTATTATCCTAGCAACAGTTAT
TTCTAGAGCACTTTCAGCGGTAGTTAATTATACGCTGAATCATCGCGTTGTTTTTAATGGAGGTGGGCGGCAAACTTTCA
TTAAATACGGGGCTTTATTTATAGTGCAGATGATTCTTTCAGGTTATCTAACGGACTTAGTTACCAATTGGTTACCACAT
AATGGAAATAGCATTGCCCCCATGTTGGCCAAAATGTTGGTTGACTTCACATTATTTATCATTAGTTACCAAATTCAAAA
AGACTTTATTTTTAAAAAAGATACTGAGGTGAATTATGCCAAAAATCAAGAAAGTTAG

Upstream 100 bases:

>100_bases
TATTACATTTGAATGTTAATGCACTTCTTTAAGGTGTATAGAGTGTATCATGATATAGGGTGGAAAATTTTTATTTTAAG
TTTAAATAATAGGTGAAATT

Downstream 100 bases:

>100_bases
TTATATTTTAGCAATTGTTCTATCAGTAATTTACCTGTTTTGGCGTGTGTTTTTTACCATTCCATGGCACGCACACATAT
TTACTTTGATTTTTGCTTTA

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRIHVLHHQHNEGKGAALKNGFR
YIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDLIIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTG
LRIIPHQYVDQLIEFPGDRFEFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI
VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALFIVQMILSGYLTDLVTNWLPH
NGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYAKNQES

Sequences:

>Translated_365_residues
MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRIHVLHHQHNEGKGAALKNGFR
YIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDLIIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTG
LRIIPHQYVDQLIEFPGDRFEFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI
VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALFIVQMILSGYLTDLVTNWLPH
NGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYAKNQES
>Mature_365_residues
MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRIHVLHHQHNEGKGAALKNGFR
YIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDLIIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTG
LRIIPHQYVDQLIEFPGDRFEFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI
VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALFIVQMILSGYLTDLVTNWLPH
NGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYAKNQES

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 41258; Mature: 41258

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRI
CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCHHE
HVLHHQHNEGKGAALKNGFRYIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDL
EHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHE
IIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTGLRIIPHQYVDQLIEFPGDRF
EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHCCCCCE
EFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI
EEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
IVQMILSGYLTDLVTNWLPHNGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCC
KNQES
CCCCC
>Mature Secondary Structure
MKKYGILIPALNPDQKLIKLVHELLNNVINFDALVLVDDGSAVTNQAVFKELEEIGDQRI
CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCHHE
HVLHHQHNEGKGAALKNGFRYIRNYFPEIEGIATMDSDGQHTVGALSSCMEKFEENPTDL
EHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHE
IIGVRKFTNEIPARSQFGNVLTSKLVKLLTHQNISDTQTGLRIIPHQYVDQLIEFPGDRF
EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHHHHHHHCCCCCE
EFEFDMLLQARKYDVKVIEQSIPTIYLDGNKSSHFRVVRDSLAIYARFFKFAGSGIISFI
EEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
VDIALFEGIILLMGNHVLDSIILATVISRALSAVVNYTLNHRVVFNGGGRQTFIKYGALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
IVQMILSGYLTDLVTNWLPHNGNSIAPMLAKMLVDFTLFIISYQIQKDFIFKKDTEVNYA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCC
KNQES
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]