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The map label for this gene is 116493420

Identifier: 116493420

GI number: 116493420

Start: 1667151

End: 1668398

Strand: Reverse

Name: 116493420

Synonym: PEPE_1692

Alternate gene names: NA

Gene position: 1668398-1667151 (Counterclockwise)

Preceding gene: 116493421

Following gene: 116493419

Centisome position: 91.05

GC content: 34.7

Gene sequence:

>1248_bases
ATGCGAGCTTTATATTTAGAACCATTCTCTGGTCTAAGTGGAGATATGCTTAATGGACTTCTTTTGGATCTTGGGGGTAA
TTTAGATTTATTAAAGGAAGAATTAAGTAAATTTACGCTTGAAGACTATACAATTCAAGTTGAAAGAACTAATAAAAGTA
GTATTTTTGGGATGGATTTTGATGTTCAAATTGCTCACCAGCATAAAGATACTGGAATAAAGGGTGATTTTGACCACCAT
GAACATTCACACCACGGTCATCATCACCATCATCATGAAAGTCGTGGATTGACTGAAATTCTGGGCTTGATTGAAAGTAG
TGATCTTTCTGACGTAGTCAAAAAGCACAGCAGCAATGTTTTCAAAGATATTGCTAAAGCGGAAGCGGCTGTACATAATG
CGGATGTTAATAAAATCCATTTTCATGAAATTGGAGCTGTGGACTCGATTGTAGATATCATTAGTTTCTTCATTTTTTGG
GAGCAATTGAAAATCGATAAGGTTTATTCGACACCGATTACTGAAGGGAGTGGCACGATTCACGTTGCACATGGAGAAAT
GCCAGTTCCAGTTCCAGCAGTAATGCAATTACGCAAAAATTATCCATTAAAAATCGTTCAAGATTTTGATATTAAAACGG
AATTGGTAACTCCTACGGGATTAGCTTTGTTTAAAGAAATCGCCCCAGAATTTACGGCCCCAGAAAACATGTACTTTAGT
CAGGTGGGTTATGGTTTTGGAAAACGAGAAACAGGAAAATTTAATGCCTTACGGGGTTCATTGCTAACTGTGGAACACAG
TAATCAGGAAGTAAAAACTAATCATGACGACATCATCAAAATTGAAGCTAATTTAGACGATCAAACTCCAGAGCAAATTG
GATATGCTATGGATATCTTGTTAGAACATGGAGCTCTAGATGTTTTTTGTTCATCAATCCAGATGAAGAAAAATCGGCCA
GCTACTTTGCTAAATGTTTTGGTGAAACCTGAAGCCTTTGACGAAATCAGTTATTTAATTTTCAAGCATACCAATACAGC
AGGTTTTCGTTATCAGGGCATGCAACGTCGGATTATGAAAAGAGAATTTAAAGAAGTTCAATTCGAAAATGAAAATTTAC
GAATTAAAAAATATCAATATCAAGATATTGAAAAATTTAAACCAGAATTTGATGACTGCGAAAAAATAGCAACTAAAAAT
GATTGGTCATTACAAGCAACATATAAAAAAATACAGAATTTATATTAA

Upstream 100 bases:

>100_bases
GTTGTTCATCTGGGGTAAGTGTTGTCAACATTGATAATGGTTTTGGGGCAGCTTATAACGCTAGCATTATCAATAAAATC
AGAGAAGGAGAATAATTTTT

Downstream 100 bases:

>100_bases
GTAGATAACAAAGGAGTTTAATTTAATGGTAAATCATCTATTAGCCGAATTTATGGGAACAGCCCTTATGATAATTTTTG
GTGTGGGAGTTCATTGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRALYLEPFSGLSGDMLNGLLLDLGGNLDLLKEELSKFTLEDYTIQVERTNKSSIFGMDFDVQIAHQHKDTGIKGDFDHH
EHSHHGHHHHHHESRGLTEILGLIESSDLSDVVKKHSSNVFKDIAKAEAAVHNADVNKIHFHEIGAVDSIVDIISFFIFW
EQLKIDKVYSTPITEGSGTIHVAHGEMPVPVPAVMQLRKNYPLKIVQDFDIKTELVTPTGLALFKEIAPEFTAPENMYFS
QVGYGFGKRETGKFNALRGSLLTVEHSNQEVKTNHDDIIKIEANLDDQTPEQIGYAMDILLEHGALDVFCSSIQMKKNRP
ATLLNVLVKPEAFDEISYLIFKHTNTAGFRYQGMQRRIMKREFKEVQFENENLRIKKYQYQDIEKFKPEFDDCEKIATKN
DWSLQATYKKIQNLY

Sequences:

>Translated_415_residues
MRALYLEPFSGLSGDMLNGLLLDLGGNLDLLKEELSKFTLEDYTIQVERTNKSSIFGMDFDVQIAHQHKDTGIKGDFDHH
EHSHHGHHHHHHESRGLTEILGLIESSDLSDVVKKHSSNVFKDIAKAEAAVHNADVNKIHFHEIGAVDSIVDIISFFIFW
EQLKIDKVYSTPITEGSGTIHVAHGEMPVPVPAVMQLRKNYPLKIVQDFDIKTELVTPTGLALFKEIAPEFTAPENMYFS
QVGYGFGKRETGKFNALRGSLLTVEHSNQEVKTNHDDIIKIEANLDDQTPEQIGYAMDILLEHGALDVFCSSIQMKKNRP
ATLLNVLVKPEAFDEISYLIFKHTNTAGFRYQGMQRRIMKREFKEVQFENENLRIKKYQYQDIEKFKPEFDDCEKIATKN
DWSLQATYKKIQNLY
>Mature_415_residues
MRALYLEPFSGLSGDMLNGLLLDLGGNLDLLKEELSKFTLEDYTIQVERTNKSSIFGMDFDVQIAHQHKDTGIKGDFDHH
EHSHHGHHHHHHESRGLTEILGLIESSDLSDVVKKHSSNVFKDIAKAEAAVHNADVNKIHFHEIGAVDSIVDIISFFIFW
EQLKIDKVYSTPITEGSGTIHVAHGEMPVPVPAVMQLRKNYPLKIVQDFDIKTELVTPTGLALFKEIAPEFTAPENMYFS
QVGYGFGKRETGKFNALRGSLLTVEHSNQEVKTNHDDIIKIEANLDDQTPEQIGYAMDILLEHGALDVFCSSIQMKKNRP
ATLLNVLVKPEAFDEISYLIFKHTNTAGFRYQGMQRRIMKREFKEVQFENENLRIKKYQYQDIEKFKPEFDDCEKIATKN
DWSLQATYKKIQNLY

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002822 [H]

Pfam domain/function: PF01969 DUF111 [H]

EC number: NA

Molecular weight: Translated: 47488; Mature: 47488

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALYLEPFSGLSGDMLNGLLLDLGGNLDLLKEELSKFTLEDYTIQVERTNKSSIFGMDF
CCEEEECCCCCCCCHHHHCCCEECCCCHHHHHHHHHHCEEEEEEEEEEECCCCEEEECCC
DVQIAHQHKDTGIKGDFDHHEHSHHGHHHHHHESRGLTEILGLIESSDLSDVVKKHSSNV
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHH
FKDIAKAEAAVHNADVNKIHFHEIGAVDSIVDIISFFIFWEQLKIDKVYSTPITEGSGTI
HHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHEECCEECCCCCCCCCEE
HVAHGEMPVPVPAVMQLRKNYPLKIVQDFDIKTELVTPTGLALFKEIAPEFTAPENMYFS
EEECCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHH
QVGYGFGKRETGKFNALRGSLLTVEHSNQEVKTNHDDIIKIEANLDDQTPEQIGYAMDIL
HHCCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LEHGALDVFCSSIQMKKNRPATLLNVLVKPEAFDEISYLIFKHTNTAGFRYQGMQRRIMK
HHCCCHHHHHHHHHHCCCCCHHHHHHEECCCHHHHHEEEEEEECCCCCCCHHHHHHHHHH
REFKEVQFENENLRIKKYQYQDIEKFKPEFDDCEKIATKNDWSLQATYKKIQNLY
HHHHHHHCCCCCEEEEEECHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRALYLEPFSGLSGDMLNGLLLDLGGNLDLLKEELSKFTLEDYTIQVERTNKSSIFGMDF
CCEEEECCCCCCCCHHHHCCCEECCCCHHHHHHHHHHCEEEEEEEEEEECCCCEEEECCC
DVQIAHQHKDTGIKGDFDHHEHSHHGHHHHHHESRGLTEILGLIESSDLSDVVKKHSSNV
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHH
FKDIAKAEAAVHNADVNKIHFHEIGAVDSIVDIISFFIFWEQLKIDKVYSTPITEGSGTI
HHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHEECCEECCCCCCCCCEE
HVAHGEMPVPVPAVMQLRKNYPLKIVQDFDIKTELVTPTGLALFKEIAPEFTAPENMYFS
EEECCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHH
QVGYGFGKRETGKFNALRGSLLTVEHSNQEVKTNHDDIIKIEANLDDQTPEQIGYAMDIL
HHCCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LEHGALDVFCSSIQMKKNRPATLLNVLVKPEAFDEISYLIFKHTNTAGFRYQGMQRRIMK
HHCCCHHHHHHHHHHCCCCCHHHHHHEECCCHHHHHEEEEEEECCCCCCCHHHHHHHHHH
REFKEVQFENENLRIKKYQYQDIEKFKPEFDDCEKIATKNDWSLQATYKKIQNLY
HHHHHHHCCCCCEEEEEECHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]