| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is nox [H]
Identifier: 116493369
GI number: 116493369
Start: 1625024
End: 1626370
Strand: Reverse
Name: nox [H]
Synonym: PEPE_1641
Alternate gene names: 116493369
Gene position: 1626370-1625024 (Counterclockwise)
Preceding gene: 116493371
Following gene: 116493368
Centisome position: 88.76
GC content: 37.94
Gene sequence:
>1347_bases ATGAAAGTAGCAATCATCGGGTGTACCCATGCTGGTACAGCAGCAGTGAGAGAAATCTTACGACAAAATCCGGATACGGA GGTAGATATTTATGAACGTAATAATAATATCTCTTTCTTATCATGTGGAATCGCATTGTATCTGAATGGACGCGTAAAAC GGCTAGAAGACATGATGTATGATGATGCAGAGGATCTCCGTTCAGAAAAAATTCGGGTGAACCTGCGACATGATGTTCTA AAAATTGACCGAAATCAAAAAGAGATTTTGGTACAAAACATGGAAGACTATAGTATTCGTCGTGAACATTACGATAAATT AGTGATGTGCACGGGTTCAGCAGTGACCTTACCTCCAATTAAAGGCATTAATCATAAACGAGTAATGCTATGTAAAAACT ATGAACAAGCGCAGACTTTACACCAAGTTTTAAAACCCCACCAGCGAGTTGCATTAATTGGTGGAGGATATGTTAACGCA GAGTTAGCAGAAAGCTTGTCTGATTTAGGTTGTCAAGTAACCTTATACCATAGTCATGATGTGATTTTAAATAATTACGT GGATGTACAGCTGAGCAAAATGTTAGTTGAAATCCTGGAAGATCACGGGGTCAAAGTTAAACTTAATAGTAAAGTCGCAT CATTCACGGATCAAAAGGACTCCTTACTGGTTACTACCATTCATGATCAAAATGAAGAAGTTGACGTAGCGATTGTTTCA AAAGGCTTCATCCCGGTAACTAATTTGTTAGAGGGGCAGGTTAAAATGAGTCGTAATGGTGCAATTTTAACTAACGAATA TGGACAAACTTCTGATCCGGATATTTACGCGGCAGGAGATGCTCGTACTGTACATTACAATCCGACGGATACAGATAGCT ATATCCCATTGGCGACGAATGCAATTCGCCAAGGTAAATTAGTTGGTATTAATATTTTCGGTAATCGTTGGCCTGAAATA GGTTCGCAAGGAACATCAGGCTTACAATTGTTTGGTTATACATTAGCTACTACCGGTTTAACCTATCAACGAGCTTTAGA TGCTGGTTTAAAGGTCAAATATATCAGCTATGAGGACAATTATCGTCCAGAATTTATGCCGACAACGGAAAAAATAAACA GTATAATTGTTTATGAACAGGACAGTTTAAAAGTTCTGGGGGCCCAATTCTTTAGTGAACATAATGTTTCTCAATTGGCT AATACAATGTCTTTAGCAATTCAGAATCAAAATACGCTGAAAGATTTAGCATTTGTGGATATGTTATTCCAACCATACTA CGATCGACCATTTAATTTTATTAACTTGGTAGCGCAGGCAGGGTTGCAACAAGAAGGGCTAATTTAA
Upstream 100 bases:
>100_bases ACAAAGTCTTAATCCAGTCTAAAATTAAAATATAAAGCATCTGGAATCGTGTAAAAAATTCTTAACAAGTAAGTCCAGTA TAAAACAAGTAGGAGGCAAA
Downstream 100 bases:
>100_bases AGAAGGAAGCGCGTAAATATGACAAGAACTGAACGAGAAAAAATGACTGCTGGAGAACCTTACCAGCAGTTTGATGCTGA ATTAATTGGTCGTCGAAAGT
Product: NAD(FAD)-dependent dehydrogenase
Products: NA
Alternate protein names: NOXase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKVAIIGCTHAGTAAVREILRQNPDTEVDIYERNNNISFLSCGIALYLNGRVKRLEDMMYDDAEDLRSEKIRVNLRHDVL KIDRNQKEILVQNMEDYSIRREHYDKLVMCTGSAVTLPPIKGINHKRVMLCKNYEQAQTLHQVLKPHQRVALIGGGYVNA ELAESLSDLGCQVTLYHSHDVILNNYVDVQLSKMLVEILEDHGVKVKLNSKVASFTDQKDSLLVTTIHDQNEEVDVAIVS KGFIPVTNLLEGQVKMSRNGAILTNEYGQTSDPDIYAAGDARTVHYNPTDTDSYIPLATNAIRQGKLVGINIFGNRWPEI GSQGTSGLQLFGYTLATTGLTYQRALDAGLKVKYISYEDNYRPEFMPTTEKINSIIVYEQDSLKVLGAQFFSEHNVSQLA NTMSLAIQNQNTLKDLAFVDMLFQPYYDRPFNFINLVAQAGLQQEGLI
Sequences:
>Translated_448_residues MKVAIIGCTHAGTAAVREILRQNPDTEVDIYERNNNISFLSCGIALYLNGRVKRLEDMMYDDAEDLRSEKIRVNLRHDVL KIDRNQKEILVQNMEDYSIRREHYDKLVMCTGSAVTLPPIKGINHKRVMLCKNYEQAQTLHQVLKPHQRVALIGGGYVNA ELAESLSDLGCQVTLYHSHDVILNNYVDVQLSKMLVEILEDHGVKVKLNSKVASFTDQKDSLLVTTIHDQNEEVDVAIVS KGFIPVTNLLEGQVKMSRNGAILTNEYGQTSDPDIYAAGDARTVHYNPTDTDSYIPLATNAIRQGKLVGINIFGNRWPEI GSQGTSGLQLFGYTLATTGLTYQRALDAGLKVKYISYEDNYRPEFMPTTEKINSIIVYEQDSLKVLGAQFFSEHNVSQLA NTMSLAIQNQNTLKDLAFVDMLFQPYYDRPFNFINLVAQAGLQQEGLI >Mature_448_residues MKVAIIGCTHAGTAAVREILRQNPDTEVDIYERNNNISFLSCGIALYLNGRVKRLEDMMYDDAEDLRSEKIRVNLRHDVL KIDRNQKEILVQNMEDYSIRREHYDKLVMCTGSAVTLPPIKGINHKRVMLCKNYEQAQTLHQVLKPHQRVALIGGGYVNA ELAESLSDLGCQVTLYHSHDVILNNYVDVQLSKMLVEILEDHGVKVKLNSKVASFTDQKDSLLVTTIHDQNEEVDVAIVS KGFIPVTNLLEGQVKMSRNGAILTNEYGQTSDPDIYAAGDARTVHYNPTDTDSYIPLATNAIRQGKLVGINIFGNRWPEI GSQGTSGLQLFGYTLATTGLTYQRALDAGLKVKYISYEDNYRPEFMPTTEKINSIIVYEQDSLKVLGAQFFSEHNVSQLA NTMSLAIQNQNTLKDLAFVDMLFQPYYDRPFNFINLVAQAGLQQEGLI
Specific function: Catalyzes the four-electron reduction of molecular oxygen to water [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI65787454, Length=287, Percent_Identity=21.602787456446, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI21389617, Length=287, Percent_Identity=21.602787456446, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI226437568, Length=287, Percent_Identity=21.602787456446, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789065, Length=217, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788892, Length=199, Percent_Identity=25.1256281407035, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789765, Length=340, Percent_Identity=23.2352941176471, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17559934, Length=269, Percent_Identity=24.5353159851301, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24639257, Length=284, Percent_Identity=22.887323943662, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI281359715, Length=284, Percent_Identity=22.887323943662, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI281359713, Length=284, Percent_Identity=22.887323943662, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639250, Length=284, Percent_Identity=22.887323943662, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI18543267, Length=284, Percent_Identity=22.887323943662, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639252, Length=284, Percent_Identity=22.887323943662, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.99.3 [H]
Molecular weight: Translated: 50372; Mature: 50372
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIIGCTHAGTAAVREILRQNPDTEVDIYERNNNISFLSCGIALYLNGRVKRLEDMMY CEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEEECCHHHHHHHHHC DDAEDLRSEKIRVNLRHDVLKIDRNQKEILVQNMEDYSIRREHYDKLVMCTGSAVTLPPI CCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHCCHHHHHHHHHCCEEEEEECCEEECCCC KGINHKRVMLCKNYEQAQTLHQVLKPHQRVALIGGGYVNAELAESLSDLGCQVTLYHSHD CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCEECHHHHHHHHHCCCEEEEEECCC VILNNYVDVQLSKMLVEILEDHGVKVKLNSKVASFTDQKDSLLVTTIHDQNEEVDVAIVS EEEECEEHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCEEEEEEECCCCCEEEEEEE KGFIPVTNLLEGQVKMSRNGAILTNEYGQTSDPDIYAAGDARTVHYNPTDTDSYIPLATN CCCCCHHHHHCCCEEECCCCCEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCEEEHH AIRQGKLVGINIFGNRWPEIGSQGTSGLQLFGYTLATTGLTYQRALDAGLKVKYISYEDN HHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHCCCHHHHHHCCCCEEEEEEECCC YRPEFMPTTEKINSIIVYEQDSLKVLGAQFFSEHNVSQLANTMSLAIQNQNTLKDLAFVD CCCCCCCCHHHCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHEEEECCCCHHHHHHHHH MLFQPYYDRPFNFINLVAQAGLQQEGLI HHHCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKVAIIGCTHAGTAAVREILRQNPDTEVDIYERNNNISFLSCGIALYLNGRVKRLEDMMY CEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEEECCHHHHHHHHHC DDAEDLRSEKIRVNLRHDVLKIDRNQKEILVQNMEDYSIRREHYDKLVMCTGSAVTLPPI CCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHCCHHHHHHHHHCCEEEEEECCEEECCCC KGINHKRVMLCKNYEQAQTLHQVLKPHQRVALIGGGYVNAELAESLSDLGCQVTLYHSHD CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCEECHHHHHHHHHCCCEEEEEECCC VILNNYVDVQLSKMLVEILEDHGVKVKLNSKVASFTDQKDSLLVTTIHDQNEEVDVAIVS EEEECEEHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCEEEEEEECCCCCEEEEEEE KGFIPVTNLLEGQVKMSRNGAILTNEYGQTSDPDIYAAGDARTVHYNPTDTDSYIPLATN CCCCCHHHHHCCCEEECCCCCEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCEEEHH AIRQGKLVGINIFGNRWPEIGSQGTSGLQLFGYTLATTGLTYQRALDAGLKVKYISYEDN HHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHCCCHHHHHHCCCCEEEEEEECCC YRPEFMPTTEKINSIIVYEQDSLKVLGAQFFSEHNVSQLANTMSLAIQNQNTLKDLAFVD CCCCCCCCHHHCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHEEEECCCCHHHHHHHHH MLFQPYYDRPFNFINLVAQAGLQQEGLI HHHCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1404382; 12663927; 2511195; 8262333 [H]