| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yqeY [H]
Identifier: 116492870
GI number: 116492870
Start: 1107363
End: 1107806
Strand: Reverse
Name: yqeY [H]
Synonym: PEPE_1108
Alternate gene names: 116492870
Gene position: 1107806-1107363 (Counterclockwise)
Preceding gene: 116492871
Following gene: 116492869
Centisome position: 60.46
GC content: 34.68
Gene sequence:
>444_bases ATGAATTTTACTGAACAACTTAATAATGATTTGAAAACAGCTATGAAAGCGCATGATAAACTTAGTTTAAGCGTGATTAG AATGATTAAATCTGAAATTTTAAATGAACAAGGACGAGTTGGCCACGAATTGAATGATGAAGACTTTGCTGCGGTTATCA ATCGTGCTTACAAGCAGCGCAAAGAGTCTATCAATGAGTTTCAAAAGGGTGGACGTGATGACCTTGTTCAAGAAACTGAA GCAGAATTAAAAGTTGTTGAAAAGTATATGCCAGAACAATTATCTGACGAAGAACTCCAAACGATTATCAGTGATGTGAT TGCTGAAACGGGTGCTACTTCTAAAGCTGATTTTGGTAAAGTAATGTCTAAATTAATGCCAAAAGTTAAGGGAAAAGCAG ACGGTTCTAAAGTCAATGAAATCGTAAAAAATACCTTAAGTTAG
Upstream 100 bases:
>100_bases GAAGCTGCTAGAAAACGTAAGAACAAGAAGCGTTTCTAATCCGATCATTGCTCCTGAATTTCAGGAGCTTTTTTTGTATA CTTAAAAGGGAGATTTAAAC
Downstream 100 bases:
>100_bases GGGACGTTTACGTGACCGAAGAAGTATTTGAAAAAAATCTAATATTATCTGATCCAAATTTAGAAGTTTCACTATTGGGA AATCAGGAACGTTTCATCCC
Product: GatB/YqeY domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNFTEQLNNDLKTAMKAHDKLSLSVIRMIKSEILNEQGRVGHELNDEDFAAVINRAYKQRKESINEFQKGGRDDLVQETE AELKVVEKYMPEQLSDEELQTIISDVIAETGATSKADFGKVMSKLMPKVKGKADGSKVNEIVKNTLS
Sequences:
>Translated_147_residues MNFTEQLNNDLKTAMKAHDKLSLSVIRMIKSEILNEQGRVGHELNDEDFAAVINRAYKQRKESINEFQKGGRDDLVQETE AELKVVEKYMPEQLSDEELQTIISDVIAETGATSKADFGKVMSKLMPKVKGKADGSKVNEIVKNTLS >Mature_147_residues MNFTEQLNNDLKTAMKAHDKLSLSVIRMIKSEILNEQGRVGHELNDEDFAAVINRAYKQRKESINEFQKGGRDDLVQETE AELKVVEKYMPEQLSDEELQTIISDVIAETGATSKADFGKVMSKLMPKVKGKADGSKVNEIVKNTLS
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16502; Mature: 16502
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFTEQLNNDLKTAMKAHDKLSLSVIRMIKSEILNEQGRVGHELNDEDFAAVINRAYKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH KESINEFQKGGRDDLVQETEAELKVVEKYMPEQLSDEELQTIISDVIAETGATSKADFGK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH VMSKLMPKVKGKADGSKVNEIVKNTLS HHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNFTEQLNNDLKTAMKAHDKLSLSVIRMIKSEILNEQGRVGHELNDEDFAAVINRAYKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH KESINEFQKGGRDDLVQETEAELKVVEKYMPEQLSDEELQTIISDVIAETGATSKADFGK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH VMSKLMPKVKGKADGSKVNEIVKNTLS HHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]