| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is phoH [H]
Identifier: 116492869
GI number: 116492869
Start: 1106383
End: 1107351
Strand: Reverse
Name: phoH [H]
Synonym: PEPE_1107
Alternate gene names: 116492869
Gene position: 1107351-1106383 (Counterclockwise)
Preceding gene: 116492870
Following gene: 116492868
Centisome position: 60.43
GC content: 38.18
Gene sequence:
>969_bases GTGACCGAAGAAGTATTTGAAAAAAATCTAATATTATCTGATCCAAATTTAGAAGTTTCACTATTGGGAAATCAGGAACG TTTCATCCCGGTGCTTGAAGAAGGGATGAATGTAAAAGTATTACCATTTGGTGAACGAATCACAATTAAAGGTTCCAAAA ATGCAGTCGAACAAACTTACGAAGTACTGAAGACTTTATTAAAAATTTTAAGGTCGGGTGTCCAATTAAACAGCGCTGAT TTTGTAAGTGCAATGAAAATGGTTGAAAAGGGAACTTTGGATTATCTTCCAGATTTGTATTCTACAATTTTGATTAAAGA TGCTAAAGGAAAACCAGTTCGAATCAAAAACTTTGGTCAAAGGCAGTACGTTCAATCCGTTAACGATAATGATGTGACCT TTGGTATTGGCCCTGCGGGTACTGGTAAAACATACTTAGCGGTGGTTATGGCCATTGCAGCCTTGAAGAAAGGTGAAGTG GAACGGATTATCTTAACACGTCCTGCGGTTGAAGCGGGTGAAAGTCTGGGATTTTTACCTGGGGATTTAAAAGAGAAGGT GGATCCTTACTTACGGCCAGTATATGATGCCTTGTATCAAATTATTGGTGCAGAGCATACCACACGCTTGTTAGATCGAG GAGTCATTGAGATTGCTCCATTGGCTTATATGCGTGGTCGGACGTTAGATAATGCCTTTGTAATTTTGGATGAAGCTCAA AATACCACTAATCAACAAATGAAAATGTTCCTGACCCGTTTAGGATTTGGTTCTAAAATGATTGTTAATGGGGATGTTAC TCAAATTGATTTACCACGTGGTACGCGAAGTGGATTAAAAGAAGCACAATTGGTTTTACAAGGAATCAATAAAATTGAAT TCGTTAACTTTACAGCTAACGACGTTATTCGTCATCCGGTAGTGGCTAAGATTGTACAAGCCTACGATGACAAAGAAGCG AAAGGATAA
Upstream 100 bases:
>100_bases GTAAAGTAATGTCTAAATTAATGCCAAAAGTTAAGGGAAAAGCAGACGGTTCTAAAGTCAATGAAATCGTAAAAAATACC TTAAGTTAGGGGACGTTTAC
Downstream 100 bases:
>100_bases ATCTGATGGATATTCAAACATTTGATCATACTAAGGAAGAAAATCCTAAAAATCTCGAATTAATTACCGATATTCTTGAA TTTGCTGGAAATTATTTGCA
Product: phosphate starvation-inducible protein PhoH, ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTEEVFEKNLILSDPNLEVSLLGNQERFIPVLEEGMNVKVLPFGERITIKGSKNAVEQTYEVLKTLLKILRSGVQLNSAD FVSAMKMVEKGTLDYLPDLYSTILIKDAKGKPVRIKNFGQRQYVQSVNDNDVTFGIGPAGTGKTYLAVVMAIAALKKGEV ERIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQIIGAEHTTRLLDRGVIEIAPLAYMRGRTLDNAFVILDEAQ NTTNQQMKMFLTRLGFGSKMIVNGDVTQIDLPRGTRSGLKEAQLVLQGINKIEFVNFTANDVIRHPVVAKIVQAYDDKEA KG
Sequences:
>Translated_322_residues MTEEVFEKNLILSDPNLEVSLLGNQERFIPVLEEGMNVKVLPFGERITIKGSKNAVEQTYEVLKTLLKILRSGVQLNSAD FVSAMKMVEKGTLDYLPDLYSTILIKDAKGKPVRIKNFGQRQYVQSVNDNDVTFGIGPAGTGKTYLAVVMAIAALKKGEV ERIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQIIGAEHTTRLLDRGVIEIAPLAYMRGRTLDNAFVILDEAQ NTTNQQMKMFLTRLGFGSKMIVNGDVTQIDLPRGTRSGLKEAQLVLQGINKIEFVNFTANDVIRHPVVAKIVQAYDDKEA KG >Mature_321_residues TEEVFEKNLILSDPNLEVSLLGNQERFIPVLEEGMNVKVLPFGERITIKGSKNAVEQTYEVLKTLLKILRSGVQLNSADF VSAMKMVEKGTLDYLPDLYSTILIKDAKGKPVRIKNFGQRQYVQSVNDNDVTFGIGPAGTGKTYLAVVMAIAALKKGEVE RIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQIIGAEHTTRLLDRGVIEIAPLAYMRGRTLDNAFVILDEAQN TTNQQMKMFLTRLGFGSKMIVNGDVTQIDLPRGTRSGLKEAQLVLQGINKIEFVNFTANDVIRHPVVAKIVQAYDDKEAK G
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=228, Percent_Identity=58.3333333333333, Blast_Score=272, Evalue=3e-74, Organism=Escherichia coli, GI1787257, Length=288, Percent_Identity=39.2361111111111, Blast_Score=197, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35704; Mature: 35573
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEVFEKNLILSDPNLEVSLLGNQERFIPVLEEGMNVKVLPFGERITIKGSKNAVEQTY CCHHHHHCCCEEECCCEEEEEECCCCHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHH EVLKTLLKILRSGVQLNSADFVSAMKMVEKGTLDYLPDLYSTILIKDAKGKPVRIKNFGQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCEEECCCCH RQYVQSVNDNDVTFGIGPAGTGKTYLAVVMAIAALKKGEVERIILTRPAVEAGESLGFLP HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCC GDLKEKVDPYLRPVYDALYQIIGAEHTTRLLDRGVIEIAPLAYMRGRTLDNAFVILDEAQ CHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCC NTTNQQMKMFLTRLGFGSKMIVNGDVTQIDLPRGTRSGLKEAQLVLQGINKIEFVNFTAN CCHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHH DVIRHPVVAKIVQAYDDKEAKG HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEEVFEKNLILSDPNLEVSLLGNQERFIPVLEEGMNVKVLPFGERITIKGSKNAVEQTY CHHHHHCCCEEECCCEEEEEECCCCHHHHHHHCCCCEEEEECCCEEEEECCCHHHHHHH EVLKTLLKILRSGVQLNSADFVSAMKMVEKGTLDYLPDLYSTILIKDAKGKPVRIKNFGQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCEEECCCCH RQYVQSVNDNDVTFGIGPAGTGKTYLAVVMAIAALKKGEVERIILTRPAVEAGESLGFLP HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCCCCCC GDLKEKVDPYLRPVYDALYQIIGAEHTTRLLDRGVIEIAPLAYMRGRTLDNAFVILDEAQ CHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCC NTTNQQMKMFLTRLGFGSKMIVNGDVTQIDLPRGTRSGLKEAQLVLQGINKIEFVNFTAN CCHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHH DVIRHPVVAKIVQAYDDKEAKG HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]