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The map label for this gene is 116492809

Identifier: 116492809

GI number: 116492809

Start: 1039633

End: 1040085

Strand: Reverse

Name: 116492809

Synonym: PEPE_1046

Alternate gene names: NA

Gene position: 1040085-1039633 (Counterclockwise)

Preceding gene: 116492811

Following gene: 116492806

Centisome position: 56.76

GC content: 34.0

Gene sequence:

>453_bases
ATGAATGAAGAACTAGCTAAGGAACTAAAAAATTACCGCGAACATTCTAATGAAAGGGCCATTAAAGAATTAATTGGCAG
CCACAATGATATAAAGAACCTGAATAAACTTTCCATTATAGAATTAGATGTGATTGCATGGATTGCCGATTATAATTTAA
AAATTAATGATTTATTGCGGTATATAAATATGACTCAAGGGGCCATATCTAAACTGGTCAATCGACTTGTTGAATATGGA
TTTGTTGAAAAATATCATATGAAAGGAAATCAAAAGGATACGTATTTGCGGCTTACCAATCTAGGTCGGGAAGTAGAGGC
TGTTCATCACCAATTTCATCAAGAACTAGAACGACGCTTAGAACAAGCACTAGATCAATTCACTGAACAAGATATTAGAA
TCACCGTTAGTGTATTGAAAAAAATCAACGCAGCCCGAAACCAATTGGATTAA

Upstream 100 bases:

>100_bases
TTTTCATAATATGCTCTTTTCTTGTACTTTTATATTCTTTGGAATATATTTAATATAGCACCAAAATTTATAAAGTCAAT
ATATATGTCGAGGAATATAA

Downstream 100 bases:

>100_bases
AAAAGCTTATTATGTTGTTTAGTCTCAGTTTTTTTAGAGATAATTAACAAACGTAATAAGCTTTTTTGTAAGTAGCGAAA
TTCTTAATCTTTAGAAAGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNEELAKELKNYREHSNERAIKELIGSHNDIKNLNKLSIIELDVIAWIADYNLKINDLLRYINMTQGAISKLVNRLVEYG
FVEKYHMKGNQKDTYLRLTNLGREVEAVHHQFHQELERRLEQALDQFTEQDIRITVSVLKKINAARNQLD

Sequences:

>Translated_150_residues
MNEELAKELKNYREHSNERAIKELIGSHNDIKNLNKLSIIELDVIAWIADYNLKINDLLRYINMTQGAISKLVNRLVEYG
FVEKYHMKGNQKDTYLRLTNLGREVEAVHHQFHQELERRLEQALDQFTEQDIRITVSVLKKINAARNQLD
>Mature_150_residues
MNEELAKELKNYREHSNERAIKELIGSHNDIKNLNKLSIIELDVIAWIADYNLKINDLLRYINMTQGAISKLVNRLVEYG
FVEKYHMKGNQKDTYLRLTNLGREVEAVHHQFHQELERRLEQALDQFTEQDIRITVSVLKKINAARNQLD

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17701; Mature: 17701

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEELAKELKNYREHSNERAIKELIGSHNDIKNLNKLSIIELDVIAWIADYNLKINDLLR
CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH
YINMTQGAISKLVNRLVEYGFVEKYHMKGNQKDTYLRLTNLGREVEAVHHQFHQELERRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EQALDQFTEQDIRITVSVLKKINAARNQLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEELAKELKNYREHSNERAIKELIGSHNDIKNLNKLSIIELDVIAWIADYNLKINDLLR
CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH
YINMTQGAISKLVNRLVEYGFVEKYHMKGNQKDTYLRLTNLGREVEAVHHQFHQELERRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EQALDQFTEQDIRITVSVLKKINAARNQLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA