Click here to switch to the map view.

The map label for this gene is 116492802

Identifier: 116492802

GI number: 116492802

Start: 1031069

End: 1031611

Strand: Reverse

Name: 116492802

Synonym: PEPE_1039

Alternate gene names: NA

Gene position: 1031611-1031069 (Counterclockwise)

Preceding gene: 116492804

Following gene: 116492796

Centisome position: 56.3

GC content: 29.1

Gene sequence:

>543_bases
ATGAAAACGTTTTTAACAGCCACATCTTTAAAAAAAGTGGTTTTATTAGATTATCTACTAGAAAGCGGGGCATGGTGTTC
TACTAAAGAATTAGCAAAAGTAATCGGTGTAACGGGTAAATCAATTTTAAATTATTTGGAAGAATTTAAGCAGTTATTCA
AGTCGACCGATCAGAAAATCAGATTATTCAACGACCATAATAAAAATTTTCGAATTATAAAAGAAGAAGATTTTCCTATC
TATACAATTTATTTGAAATTCTATCAAGCCTCTTACAATTACAAATTAATTGATTTTATGTACCATAACCCTCACCAACG
ATTGGCTGACTATGCAGATAGTCAGTTTACGAGTATATCAACAGTTTTTAGATACGCTAAATTACTAAAATCGTATTTTA
AACGTTATAAAATTCAATTTTTACCGTATAAGTTGGAATTAAAAGGAGATGAAATCAATATTCGTAGTTTTTATTATTAC
TTTTATTGGAACTCCACACGGGAAATGCGGAATAATTGGCCATTTAATACTGAAACATTCTAG

Upstream 100 bases:

>100_bases
AGTTTTTTTTGGAAATATTTAAAGAAATCTACTTAAAAACTTTTTAGCTGACAAAGTTTAGCTTATTTGTAGTAAATTTA
AATCTTATGTGAGGTATAAA

Downstream 100 bases:

>100_bases
CCACTATGAACGCCGTTATATCAATATTTGTTTATCGCTTTGGGGACATTTGGGGACACTGACAATATTTCTATCGTTTT
ATCTTGTTCACGGGTCTTCT

Product: transcription regulator

Products: NA

Alternate protein names: Trans-Acting Positive Regulator

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKTFLTATSLKKVVLLDYLLESGAWCSTKELAKVIGVTGKSILNYLEEFKQLFKSTDQKIRLFNDHNKNFRIIKEEDFPI
YTIYLKFYQASYNYKLIDFMYHNPHQRLADYADSQFTSISTVFRYAKLLKSYFKRYKIQFLPYKLELKGDEINIRSFYYY
FYWNSTREMRNNWPFNTETF

Sequences:

>Translated_180_residues
MKTFLTATSLKKVVLLDYLLESGAWCSTKELAKVIGVTGKSILNYLEEFKQLFKSTDQKIRLFNDHNKNFRIIKEEDFPI
YTIYLKFYQASYNYKLIDFMYHNPHQRLADYADSQFTSISTVFRYAKLLKSYFKRYKIQFLPYKLELKGDEINIRSFYYY
FYWNSTREMRNNWPFNTETF
>Mature_180_residues
MKTFLTATSLKKVVLLDYLLESGAWCSTKELAKVIGVTGKSILNYLEEFKQLFKSTDQKIRLFNDHNKNFRIIKEEDFPI
YTIYLKFYQASYNYKLIDFMYHNPHQRLADYADSQFTSISTVFRYAKLLKSYFKRYKIQFLPYKLELKGDEINIRSFYYY
FYWNSTREMRNNWPFNTETF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21910; Mature: 21910

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFLTATSLKKVVLLDYLLESGAWCSTKELAKVIGVTGKSILNYLEEFKQLFKSTDQKI
CCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
RLFNDHNKNFRIIKEEDFPIYTIYLKFYQASYNYKLIDFMYHNPHQRLADYADSQFTSIS
EEEECCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHCCHHHHHH
TVFRYAKLLKSYFKRYKIQFLPYKLELKGDEINIRSFYYYFYWNSTREMRNNWPFNTETF
HHHHHHHHHHHHHHHHEEEECCEEEEEECCEEEEEEEEEEEEECCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKTFLTATSLKKVVLLDYLLESGAWCSTKELAKVIGVTGKSILNYLEEFKQLFKSTDQKI
CCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
RLFNDHNKNFRIIKEEDFPIYTIYLKFYQASYNYKLIDFMYHNPHQRLADYADSQFTSIS
EEEECCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHCCHHHHHH
TVFRYAKLLKSYFKRYKIQFLPYKLELKGDEINIRSFYYYFYWNSTREMRNNWPFNTETF
HHHHHHHHHHHHHHHHEEEECCEEEEEECCEEEEEEEEEEEEECCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA