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The map label for this gene is ymfN [C]

Identifier: 116492768

GI number: 116492768

Start: 1013979

End: 1015877

Strand: Reverse

Name: ymfN [C]

Synonym: PEPE_1005

Alternate gene names: 116492768

Gene position: 1015877-1013979 (Counterclockwise)

Preceding gene: 116492769

Following gene: 116492767

Centisome position: 55.44

GC content: 39.34

Gene sequence:

>1899_bases
ATGAAGGTTGATTTAACACAAACACATGATGTTATTGGAGCTTATCAAGCATTGGACTGCTCAGCGATTCGCCAACAATA
TACAGACGCAGGAACTCAGTACGCTTTAGATGTTTTAGATCAGAAGATAACTACTGGTTATTTGATCAAGTTAGCGGCTT
TCCGCCATATTAGAGACTTGCAACGACAAGGTAGCGTTGAATTCCCATTTGCTTATTCGGTAAAGCGAGTGGATCAAGTG
CTTAAATTTGCTTCCATTTGTCCGAACGTTGATACAGGCGAACCAACTAAACTAATGCCGTGGCAAAAGTTCATTATGGC
GATGTTAATTGGCTGGCGTAATGATGACGGTGGTAAGCGTTTCTCACGGGCTATTGTTTCCGTTTCACGTGGCCAAGGTA
AAACTTACCTTATGGCGATTATCACTGCATATAGTTTCCTAATTGAATCACTAGGACTATCTAACCAAGACTATTTAGTT
TCATCCATTAATTACAAACAAACTAGCAAGATTCTGGGCTACATTAAATCAATGTTAGCCAAGATTGCAACAATTGAACC
ATTTAAAACACTAATGCAAGATAGTGGATTAGATACACGGACATTGTCATCTCAATCTGACCAAGTTGTGATGAGCAGTA
ACAACAACAAGCTGCGAGCAATCAGTCATGAAGCCGGTCAGTACGACTCGTTTCATTTTACAACGGCTATTTTTGATGAA
ATTGGTGAAATTAAGACACGGCAGAAGATTTCTAAAATTGTGTCAGGCCAAGTTAAGGTGCGCAATAAGCAATTTATTCA
AATTTCAACGGCTTATCCCGATCCAACCGTACCATTCCATGATGATGAGCGTATGATTCAGCAAGCCATGGAACAGGATT
ATTTGCGTGATGCTGATACATATTTGGGACTTATTTGGTCGCAGGATGATTTGAATGAAACTTACAAGCCCGATACGTGG
GTTAAAAGTAATCCCTTACTAGATTTACCAAGTCAACGAGAAGTTTTGCTAAACGGCTTGACGGATAAGCGTGATTCTGA
CGCTTTGTCTGGCACACTCAACGACTTTCAAAACAAAAACCTTAACTTGTGGCTAGAACAATCAACTGACAGCTTCTTGA
AACTGCCTGACGTTGAAAAAGCCATTGTGCAATCGTTTAGTTTTGATGATCGGCAAGTCTATATTGGCTTTGACTACTCG
ATGTTTAGTGATAACACGGCGTTAGCGTTTGTATTCCCTTATCGTGATAATAATGGTAAACCACGATGGTTTATTTATCA
GCATAGTTTTATCCCATGGCAGAAAGCCGGTTCGATTGAAGCTAAAGAAAAGCAAGACGGTATTAATTATCGGGACTTAG
CTAAAAAAGGATTTTGCACAATTAGTAGCCACCCACAAGGACTAATCAATGATGAGCAGGTTTATCAGTGGTTGCTTAAA
TTTGTTGAGCAACATCGACTGGAAGTTGTTTTCTTTGGTTATGACGCTTGGGGACTAACGCCTACAATTAAACAATTAGA
TTTAAATTCAGGATGGCCGTTGCAAGCCATTCGGCAGCGAACTAGTGAATTGAAAGATCCAACTAAGTTTTTGCAGACAA
TGTTTGTTGAAGGCTCAGTCGACCGCTTGGATGATCGAATTATGGAAAAGGCGTTACTAAATGCTGAAATTTATGAAGAT
AAAATTGGTATTCAAGTCGATAAAGCTAAGGCCACATTGAAGATTGATGTAGTTGATGCGTTAATTGACGCCTTATTCCA
AGCCATGTATCACTTTGAAGACTTTGCAGATGTGAACAATCCTGATAAACAGGTCGAACGTATGAACGAAAAACAAGTTC
TTGAATGGTTTAATAACCCGGAATCGGGATTGCTAGGAGATGATATGAATGATTTTTAA

Upstream 100 bases:

>100_bases
CGCCAAAATCTCGTAGTGATTTAATCAAGTTAAACTTAGATGACCACAAAGACGAGCGAAGCGTCGCTGATCGTATGAAA
GAATTTTTAGGAGGATAATA

Downstream 100 bases:

>100_bases
ACAATTTTTTGCAACTATCTGGCGTTACTTTGATGTGTTGTGCTTTATTCTAGGTATGATTGCTGGAGTATATGCAGCCT
TTTTATTTGGTCAAGCACAA

Product: Phage terminase-like protein, large subunit

Products: NA

Alternate protein names: Terminase; Terminase Large Subunit; Phage Terminase; Prophage; Phage Terminase-Like Protein Large Subunit; Phage-Related Terminase Large Subunit; Bacteriophage Terminase Large Subunit; Prophage Terminase Large Subunit; Prophage Lp3 Terminase Large Subunit; Prophage LambdaSa; Phage-Terminase Large Subunit; Phage Terminase-Like Protein; Phage Large Terminase Subunit; Bacteriophage Terminase-Like Protein Large Subunit; Phage Related Terminase Large Sub-Unit; Terminase-Large Subunit; Phage-Related Terminase

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MKVDLTQTHDVIGAYQALDCSAIRQQYTDAGTQYALDVLDQKITTGYLIKLAAFRHIRDLQRQGSVEFPFAYSVKRVDQV
LKFASICPNVDTGEPTKLMPWQKFIMAMLIGWRNDDGGKRFSRAIVSVSRGQGKTYLMAIITAYSFLIESLGLSNQDYLV
SSINYKQTSKILGYIKSMLAKIATIEPFKTLMQDSGLDTRTLSSQSDQVVMSSNNNKLRAISHEAGQYDSFHFTTAIFDE
IGEIKTRQKISKIVSGQVKVRNKQFIQISTAYPDPTVPFHDDERMIQQAMEQDYLRDADTYLGLIWSQDDLNETYKPDTW
VKSNPLLDLPSQREVLLNGLTDKRDSDALSGTLNDFQNKNLNLWLEQSTDSFLKLPDVEKAIVQSFSFDDRQVYIGFDYS
MFSDNTALAFVFPYRDNNGKPRWFIYQHSFIPWQKAGSIEAKEKQDGINYRDLAKKGFCTISSHPQGLINDEQVYQWLLK
FVEQHRLEVVFFGYDAWGLTPTIKQLDLNSGWPLQAIRQRTSELKDPTKFLQTMFVEGSVDRLDDRIMEKALLNAEIYED
KIGIQVDKAKATLKIDVVDALIDALFQAMYHFEDFADVNNPDKQVERMNEKQVLEWFNNPESGLLGDDMNDF

Sequences:

>Translated_632_residues
MKVDLTQTHDVIGAYQALDCSAIRQQYTDAGTQYALDVLDQKITTGYLIKLAAFRHIRDLQRQGSVEFPFAYSVKRVDQV
LKFASICPNVDTGEPTKLMPWQKFIMAMLIGWRNDDGGKRFSRAIVSVSRGQGKTYLMAIITAYSFLIESLGLSNQDYLV
SSINYKQTSKILGYIKSMLAKIATIEPFKTLMQDSGLDTRTLSSQSDQVVMSSNNNKLRAISHEAGQYDSFHFTTAIFDE
IGEIKTRQKISKIVSGQVKVRNKQFIQISTAYPDPTVPFHDDERMIQQAMEQDYLRDADTYLGLIWSQDDLNETYKPDTW
VKSNPLLDLPSQREVLLNGLTDKRDSDALSGTLNDFQNKNLNLWLEQSTDSFLKLPDVEKAIVQSFSFDDRQVYIGFDYS
MFSDNTALAFVFPYRDNNGKPRWFIYQHSFIPWQKAGSIEAKEKQDGINYRDLAKKGFCTISSHPQGLINDEQVYQWLLK
FVEQHRLEVVFFGYDAWGLTPTIKQLDLNSGWPLQAIRQRTSELKDPTKFLQTMFVEGSVDRLDDRIMEKALLNAEIYED
KIGIQVDKAKATLKIDVVDALIDALFQAMYHFEDFADVNNPDKQVERMNEKQVLEWFNNPESGLLGDDMNDF
>Mature_632_residues
MKVDLTQTHDVIGAYQALDCSAIRQQYTDAGTQYALDVLDQKITTGYLIKLAAFRHIRDLQRQGSVEFPFAYSVKRVDQV
LKFASICPNVDTGEPTKLMPWQKFIMAMLIGWRNDDGGKRFSRAIVSVSRGQGKTYLMAIITAYSFLIESLGLSNQDYLV
SSINYKQTSKILGYIKSMLAKIATIEPFKTLMQDSGLDTRTLSSQSDQVVMSSNNNKLRAISHEAGQYDSFHFTTAIFDE
IGEIKTRQKISKIVSGQVKVRNKQFIQISTAYPDPTVPFHDDERMIQQAMEQDYLRDADTYLGLIWSQDDLNETYKPDTW
VKSNPLLDLPSQREVLLNGLTDKRDSDALSGTLNDFQNKNLNLWLEQSTDSFLKLPDVEKAIVQSFSFDDRQVYIGFDYS
MFSDNTALAFVFPYRDNNGKPRWFIYQHSFIPWQKAGSIEAKEKQDGINYRDLAKKGFCTISSHPQGLINDEQVYQWLLK
FVEQHRLEVVFFGYDAWGLTPTIKQLDLNSGWPLQAIRQRTSELKDPTKFLQTMFVEGSVDRLDDRIMEKALLNAEIYED
KIGIQVDKAKATLKIDVVDALIDALFQAMYHFEDFADVNNPDKQVERMNEKQVLEWFNNPESGLLGDDMNDF

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72457; Mature: 72457

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDLTQTHDVIGAYQALDCSAIRQQYTDAGTQYALDVLDQKITTGYLIKLAAFRHIRDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQGSVEFPFAYSVKRVDQVLKFASICPNVDTGEPTKLMPWQKFIMAMLIGWRNDDGGKR
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH
FSRAIVSVSRGQGKTYLMAIITAYSFLIESLGLSNQDYLVSSINYKQTSKILGYIKSMLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHH
KIATIEPFKTLMQDSGLDTRTLSSQSDQVVMSSNNNKLRAISHEAGQYDSFHFTTAIFDE
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEHHHHHHHH
IGEIKTRQKISKIVSGQVKVRNKQFIQISTAYPDPTVPFHDDERMIQQAMEQDYLRDADT
HHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
YLGLIWSQDDLNETYKPDTWVKSNPLLDLPSQREVLLNGLTDKRDSDALSGTLNDFQNKN
HEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
LNLWLEQSTDSFLKLPDVEKAIVQSFSFDDRQVYIGFDYSMFSDNTALAFVFPYRDNNGK
CEEEEECCCCCCEECCCHHHHHHHHCCCCCCEEEEEEEHEEECCCCEEEEEEEEECCCCC
PRWFIYQHSFIPWQKAGSIEAKEKQDGINYRDLAKKGFCTISSHPQGLINDEQVYQWLLK
EEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHHH
FVEQHRLEVVFFGYDAWGLTPTIKQLDLNSGWPLQAIRQRTSELKDPTKFLQTMFVEGSV
HHHHCCEEEEEEECCCCCCCCCHHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCH
DRLDDRIMEKALLNAEIYEDKIGIQVDKAKATLKIDVVDALIDALFQAMYHFEDFADVNN
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
PDKQVERMNEKQVLEWFNNPESGLLGDDMNDF
HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVDLTQTHDVIGAYQALDCSAIRQQYTDAGTQYALDVLDQKITTGYLIKLAAFRHIRDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQGSVEFPFAYSVKRVDQVLKFASICPNVDTGEPTKLMPWQKFIMAMLIGWRNDDGGKR
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH
FSRAIVSVSRGQGKTYLMAIITAYSFLIESLGLSNQDYLVSSINYKQTSKILGYIKSMLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHH
KIATIEPFKTLMQDSGLDTRTLSSQSDQVVMSSNNNKLRAISHEAGQYDSFHFTTAIFDE
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEHHHHHHHH
IGEIKTRQKISKIVSGQVKVRNKQFIQISTAYPDPTVPFHDDERMIQQAMEQDYLRDADT
HHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
YLGLIWSQDDLNETYKPDTWVKSNPLLDLPSQREVLLNGLTDKRDSDALSGTLNDFQNKN
HEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
LNLWLEQSTDSFLKLPDVEKAIVQSFSFDDRQVYIGFDYSMFSDNTALAFVFPYRDNNGK
CEEEEECCCCCCEECCCHHHHHHHHCCCCCCEEEEEEEHEEECCCCEEEEEEEEECCCCC
PRWFIYQHSFIPWQKAGSIEAKEKQDGINYRDLAKKGFCTISSHPQGLINDEQVYQWLLK
EEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHHH
FVEQHRLEVVFFGYDAWGLTPTIKQLDLNSGWPLQAIRQRTSELKDPTKFLQTMFVEGSV
HHHHCCEEEEEEECCCCCCCCCHHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCH
DRLDDRIMEKALLNAEIYEDKIGIQVDKAKATLKIDVVDALIDALFQAMYHFEDFADVNN
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
PDKQVERMNEKQVLEWFNNPESGLLGDDMNDF
HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA