| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492761
Identifier: 116492761
GI number: 116492761
Start: 1009511
End: 1009918
Strand: Reverse
Name: 116492761
Synonym: PEPE_0998
Alternate gene names: NA
Gene position: 1009918-1009511 (Counterclockwise)
Preceding gene: 116492762
Following gene: 116492760
Centisome position: 55.11
GC content: 38.97
Gene sequence:
>408_bases ATGGCAAAAGATAACATAGTCGACCAATTAGAAAACTGGCTTAAAGACGTCCACAAGCTAGTCCCTGACGAAGCTGAACA AGAGAAAATAACCCAAGCAGGCGCTAAAAAGCTAGCTGATAACTTGACGGAAGTTACGCGAAAGAAGCATTACAGCTCAC ATAAAGACGAGAAGTACGGACATATGGCTGATAATATAAGTTACAACAGCACTGACATAGACGGTGAACATAATGGTAGA TCAATTGTCGGGTGGACTAATAAATATCATGATATGAATGCCAGACGTTTAAATGATGGTACTAAACATATTAGAGCTGA CCATTTTGTTGATGATAATTTAACTGACTCACAAGATGATGTCTTTAACGCCATGCTAGATGAGTATAAGAAGGGTGGCG ATGACTAA
Upstream 100 bases:
>100_bases GCAAACTTTACGATGTCATTAATGACAGCATTGATGATTCTAGTAATTATCTATCTTGCGATTATTTAACGCTAAAACAG GTTACTAAGGGGGCTTAGCT
Downstream 100 bases:
>100_bases TGCTATTACCAGTATCACAGGTATCCAGTATAGTTAATGCCCTCAATTTAACGTGGCTTGATAAAGTCTACCTGAACGAA ATACCTAACGAAGATTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAKDNIVDQLENWLKDVHKLVPDEAEQEKITQAGAKKLADNLTEVTRKKHYSSHKDEKYGHMADNISYNSTDIDGEHNGR SIVGWTNKYHDMNARRLNDGTKHIRADHFVDDNLTDSQDDVFNAMLDEYKKGGDD
Sequences:
>Translated_135_residues MAKDNIVDQLENWLKDVHKLVPDEAEQEKITQAGAKKLADNLTEVTRKKHYSSHKDEKYGHMADNISYNSTDIDGEHNGR SIVGWTNKYHDMNARRLNDGTKHIRADHFVDDNLTDSQDDVFNAMLDEYKKGGDD >Mature_134_residues AKDNIVDQLENWLKDVHKLVPDEAEQEKITQAGAKKLADNLTEVTRKKHYSSHKDEKYGHMADNISYNSTDIDGEHNGRS IVGWTNKYHDMNARRLNDGTKHIRADHFVDDNLTDSQDDVFNAMLDEYKKGGDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15502; Mature: 15371
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDNIVDQLENWLKDVHKLVPDEAEQEKITQAGAKKLADNLTEVTRKKHYSSHKDEKYG CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC HMADNISYNSTDIDGEHNGRSIVGWTNKYHDMNARRLNDGTKHIRADHFVDDNLTDSQDD CHHCCCCCCCCCCCCCCCCCEEECCCCHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCHHH VFNAMLDEYKKGGDD HHHHHHHHHHCCCCC >Mature Secondary Structure AKDNIVDQLENWLKDVHKLVPDEAEQEKITQAGAKKLADNLTEVTRKKHYSSHKDEKYG CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC HMADNISYNSTDIDGEHNGRSIVGWTNKYHDMNARRLNDGTKHIRADHFVDDNLTDSQDD CHHCCCCCCCCCCCCCCCCCEEECCCCHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCHHH VFNAMLDEYKKGGDD HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA