| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492760
Identifier: 116492760
GI number: 116492760
Start: 1009131
End: 1009511
Strand: Reverse
Name: 116492760
Synonym: PEPE_0997
Alternate gene names: NA
Gene position: 1009511-1009131 (Counterclockwise)
Preceding gene: 116492761
Following gene: 116492759
Centisome position: 55.09
GC content: 37.53
Gene sequence:
>381_bases ATGCTATTACCAGTATCACAGGTATCCAGTATAGTTAATGCCCTCAATTTAACGTGGCTTGATAAAGTCTACCTGAACGA AATACCTAACGAAGATTTAGACAACACTGATACTACAGTCATGCTATTACAAGAAACTGATTCAAGTCCAGCCTATCATG CCAATAGCACGTTTAAAGGCTTAGCAATGGGGGTTGAGGTTCAAATCTTTTATAAGGTTGACCTAGAAGACGACTTTAAT CCGATTGAAGCTGAAATAGCTTTGCTAAAAGCTCTTAAAGACGCAGGCTGGTTGATTGTAGCTAGTCAGCACCACACAAC TGATCCAGATACCAACCAATTGACCAAAACAATTTACTTAACTAAAAATGAAATGATATAA
Upstream 100 bases:
>100_bases ATATTAGAGCTGACCATTTTGTTGATGATAATTTAACTGACTCACAAGATGATGTCTTTAACGCCATGCTAGATGAGTAT AAGAAGGGTGGCGATGACTA
Downstream 100 bases:
>100_bases AGGAGAGATTTATAAATGTCAAAACATAATATTGTAAAAGCAACTTTTGCTTTACTAGACGATAACGGAGACTTAATCAA AGACGCTACCAAAGGCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Pi3 Protein; Prophage Pi1 Protein; Phage Tail Protein
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MLLPVSQVSSIVNALNLTWLDKVYLNEIPNEDLDNTDTTVMLLQETDSSPAYHANSTFKGLAMGVEVQIFYKVDLEDDFN PIEAEIALLKALKDAGWLIVASQHHTTDPDTNQLTKTIYLTKNEMI
Sequences:
>Translated_126_residues MLLPVSQVSSIVNALNLTWLDKVYLNEIPNEDLDNTDTTVMLLQETDSSPAYHANSTFKGLAMGVEVQIFYKVDLEDDFN PIEAEIALLKALKDAGWLIVASQHHTTDPDTNQLTKTIYLTKNEMI >Mature_126_residues MLLPVSQVSSIVNALNLTWLDKVYLNEIPNEDLDNTDTTVMLLQETDSSPAYHANSTFKGLAMGVEVQIFYKVDLEDDFN PIEAEIALLKALKDAGWLIVASQHHTTDPDTNQLTKTIYLTKNEMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14125; Mature: 14125
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPVSQVSSIVNALNLTWLDKVYLNEIPNEDLDNTDTTVMLLQETDSSPAYHANSTFKG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCE LAMGVEVQIFYKVDLEDDFNPIEAEIALLKALKDAGWLIVASQHHTTDPDTNQLTKTIYL EEECEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEE TKNEMI ECCCCC >Mature Secondary Structure MLLPVSQVSSIVNALNLTWLDKVYLNEIPNEDLDNTDTTVMLLQETDSSPAYHANSTFKG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCE LAMGVEVQIFYKVDLEDDFNPIEAEIALLKALKDAGWLIVASQHHTTDPDTNQLTKTIYL EEECEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEE TKNEMI ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA