Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492755

Identifier: 116492755

GI number: 116492755

Start: 1001148

End: 1002914

Strand: Reverse

Name: 116492755

Synonym: PEPE_0992

Alternate gene names: NA

Gene position: 1002914-1001148 (Counterclockwise)

Preceding gene: 116492756

Following gene: 116492754

Centisome position: 54.73

GC content: 43.07

Gene sequence:

>1767_bases
GTGACCTTACAACGAGATGATTTTGAATATGCTGGATTAAATAGCCGGGACGATTTACAGGTTGAGATGGGTAACGTGGT
ATTGCCTAGTGCACCTGCCATGGCTGAACAGGTGACTGACATACCGGCCATGTATGGTAACCAGTTTAATGGCACGGACT
TTACTAGTCGGACGATTAATATTCCGGTATCAATCTACTGTGCTGATAATCAAGACAGGTTTAATCAGGTGATGCACAAT
TTAAGCGGTTTATTACTAAGTGATGACCCTAGTGATAATGGTAAAGAATATCCACTAGTATTTGGCTTTGAACCTAAGGT
GACGTATTGGGGACATATTACCGCAATTAGTGATCCAGCCCCAATTAATCCGGGTATGTATGACATGACGCTTACGATTA
CCTTTGTGCAGTCTGATCCCCGAGCAACCCTGCCACAAGTTGAGAAGCCTTTAAACAATGGCTTAAACACGATTACTGTT
GACGGTACTGCACGAACAGCTCCAGTTGTCCAAGTTGTGCCTAAACGACCATTAAAATACATTGGTTTTAATCTTAATGG
CGGTCAGTTTGGCTTAGGGCCGGAAACCCCTGACGACCAAGCTAATGCTATTCAACCCGATACTGATGTGCTCAATGATC
CCATTGCTAGTATGGCGATGTGGACTAATGATGCCAATGCCATTAGTGGCATTAGAACCGATGGTAATTATAAATATCAA
GGTAGCGCTCAGATTGATGAAAATAGCACATCCATGCGATTGGCCTTTGCGAATGGTTCAAAAGACTTTGGGCCGATATC
AGATAATCCACCTGATGCTTGGCTAGGCCCAACTTATCGGTATACTGGGATGACTCAGTCTTTAACCAACTATCGTGTTC
GTACTGGATTGCATCACATACGACACCAAGGTACTCATAATGGTCGGGCAATGGGAAAAGTACAATTTTCATTACTCGAT
GCCAGTGGTAATACAATTGGCCGGTTTGTCATTGGTGACCACATGGAAGGTGGTAAGACCTATGCGACACTGCAGCTATG
CAAGCCGGGAAGTAATTTTAAAGATGGCAACTACAAAACACTTTACTGGGGATATGGCCCTAGCGGTGCATTTTACAATA
AAAGAGACCAAAAAGTTAATATTAAAACTGGAACAACCACTAAAACAGTGACTAAAACCAGCAGGTCTAAGCGTGGCAAG
GTGACGAAGAAAACAATCAAAGAAACCGTAAATAAGTATGCTACAGTCGTTAACAAACATGAAGGCAACGCCTTAACCAA
TGCTTGGGTATTTATGGACATGACGAAAGCCGGCAATGTTTATACGTGGGAATTACATCAATACAGTCCCTATACTGGCC
AGCCTTATCATGATAGAAACCAGCGTTTAATTGTGAGCGGTCGCTGGGTAGATACTAACCATGAATTCGATTCAGCCTTA
GGTGGATTTGGTCAAACATTCCTCAAACACCCAATCACGGAAGACAAGGAAAAAGTACCATACGTAGTTCCTTATATGGC
TCTCACCGATATACAAGTCTGGCAACACAACCAGCCACAACCGAATGAACCTACTTATATTGCTAATGCAGGGGAAGAAA
TTGTCATGGATTGTGAGGCTGATACCGTAACCGTCAATGGACGATTGGTATCGCCAGTATGGTCAACCGATTATCCGCAA
TTAAAGCCGGGTGTTAATGGGCTAACTATGGTTGGCGACTTAGATGACGCTCAAATGACGCTTAAATACCTGCCAAAACT
ATTATAG

Upstream 100 bases:

>100_bases
ACTCACAAATGATGGGGTACTAATATCATAATCAACCAAAGGGTCGTCCTTAATTGGACGCCCTTTTTTACATAGTTAAA
TTTAAAAAGGAGGTTAAATC

Downstream 100 bases:

>100_bases
CAACATAAGGAGGTTAACCGATGGCTTTAGCCAATCAATATTTAATTCTAAATCCAAGTTTGAAACGGATTGGCACCCTT
ACTATTGATGGTGCCACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTLQRDDFEYAGLNSRDDLQVEMGNVVLPSAPAMAEQVTDIPAMYGNQFNGTDFTSRTINIPVSIYCADNQDRFNQVMHN
LSGLLLSDDPSDNGKEYPLVFGFEPKVTYWGHITAISDPAPINPGMYDMTLTITFVQSDPRATLPQVEKPLNNGLNTITV
DGTARTAPVVQVVPKRPLKYIGFNLNGGQFGLGPETPDDQANAIQPDTDVLNDPIASMAMWTNDANAISGIRTDGNYKYQ
GSAQIDENSTSMRLAFANGSKDFGPISDNPPDAWLGPTYRYTGMTQSLTNYRVRTGLHHIRHQGTHNGRAMGKVQFSLLD
ASGNTIGRFVIGDHMEGGKTYATLQLCKPGSNFKDGNYKTLYWGYGPSGAFYNKRDQKVNIKTGTTTKTVTKTSRSKRGK
VTKKTIKETVNKYATVVNKHEGNALTNAWVFMDMTKAGNVYTWELHQYSPYTGQPYHDRNQRLIVSGRWVDTNHEFDSAL
GGFGQTFLKHPITEDKEKVPYVVPYMALTDIQVWQHNQPQPNEPTYIANAGEEIVMDCEADTVTVNGRLVSPVWSTDYPQ
LKPGVNGLTMVGDLDDAQMTLKYLPKLL

Sequences:

>Translated_588_residues
MTLQRDDFEYAGLNSRDDLQVEMGNVVLPSAPAMAEQVTDIPAMYGNQFNGTDFTSRTINIPVSIYCADNQDRFNQVMHN
LSGLLLSDDPSDNGKEYPLVFGFEPKVTYWGHITAISDPAPINPGMYDMTLTITFVQSDPRATLPQVEKPLNNGLNTITV
DGTARTAPVVQVVPKRPLKYIGFNLNGGQFGLGPETPDDQANAIQPDTDVLNDPIASMAMWTNDANAISGIRTDGNYKYQ
GSAQIDENSTSMRLAFANGSKDFGPISDNPPDAWLGPTYRYTGMTQSLTNYRVRTGLHHIRHQGTHNGRAMGKVQFSLLD
ASGNTIGRFVIGDHMEGGKTYATLQLCKPGSNFKDGNYKTLYWGYGPSGAFYNKRDQKVNIKTGTTTKTVTKTSRSKRGK
VTKKTIKETVNKYATVVNKHEGNALTNAWVFMDMTKAGNVYTWELHQYSPYTGQPYHDRNQRLIVSGRWVDTNHEFDSAL
GGFGQTFLKHPITEDKEKVPYVVPYMALTDIQVWQHNQPQPNEPTYIANAGEEIVMDCEADTVTVNGRLVSPVWSTDYPQ
LKPGVNGLTMVGDLDDAQMTLKYLPKLL
>Mature_587_residues
TLQRDDFEYAGLNSRDDLQVEMGNVVLPSAPAMAEQVTDIPAMYGNQFNGTDFTSRTINIPVSIYCADNQDRFNQVMHNL
SGLLLSDDPSDNGKEYPLVFGFEPKVTYWGHITAISDPAPINPGMYDMTLTITFVQSDPRATLPQVEKPLNNGLNTITVD
GTARTAPVVQVVPKRPLKYIGFNLNGGQFGLGPETPDDQANAIQPDTDVLNDPIASMAMWTNDANAISGIRTDGNYKYQG
SAQIDENSTSMRLAFANGSKDFGPISDNPPDAWLGPTYRYTGMTQSLTNYRVRTGLHHIRHQGTHNGRAMGKVQFSLLDA
SGNTIGRFVIGDHMEGGKTYATLQLCKPGSNFKDGNYKTLYWGYGPSGAFYNKRDQKVNIKTGTTTKTVTKTSRSKRGKV
TKKTIKETVNKYATVVNKHEGNALTNAWVFMDMTKAGNVYTWELHQYSPYTGQPYHDRNQRLIVSGRWVDTNHEFDSALG
GFGQTFLKHPITEDKEKVPYVVPYMALTDIQVWQHNQPQPNEPTYIANAGEEIVMDCEADTVTVNGRLVSPVWSTDYPQL
KPGVNGLTMVGDLDDAQMTLKYLPKLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65207; Mature: 65076

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQRDDFEYAGLNSRDDLQVEMGNVVLPSAPAMAEQVTDIPAMYGNQFNGTDFTSRTIN
CCCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHCHHHHCCCCCCCCCCCEEEE
IPVSIYCADNQDRFNQVMHNLSGLLLSDDPSDNGKEYPLVFGFEPKVTYWGHITAISDPA
EEEEEEECCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEECCCC
PINPGMYDMTLTITFVQSDPRATLPQVEKPLNNGLNTITVDGTARTAPVVQVVPKRPLKY
CCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEEE
IGFNLNGGQFGLGPETPDDQANAIQPDTDVLNDPIASMAMWTNDANAISGIRTDGNYKYQ
EEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCHHHHEEECCCCCHHCCEEECCCEEEE
GSAQIDENSTSMRLAFANGSKDFGPISDNPPDAWLGPTYRYTGMTQSLTNYRVRTGLHHI
CCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
RHQGTHNGRAMGKVQFSLLDASGNTIGRFVIGDHMEGGKTYATLQLCKPGSNFKDGNYKT
HHCCCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEE
LYWGYGPSGAFYNKRDQKVNIKTGTTTKTVTKTSRSKRGKVTKKTIKETVNKYATVVNKH
EEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHCCC
EGNALTNAWVFMDMTKAGNVYTWELHQYSPYTGQPYHDRNQRLIVSGRWVDTNHEFDSAL
CCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHH
GGFGQTFLKHPITEDKEKVPYVVPYMALTDIQVWQHNQPQPNEPTYIANAGEEIVMDCEA
HHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEECCC
DTVTVNGRLVSPVWSTDYPQLKPGVNGLTMVGDLDDAQMTLKYLPKLL
CEEEECCEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLQRDDFEYAGLNSRDDLQVEMGNVVLPSAPAMAEQVTDIPAMYGNQFNGTDFTSRTIN
CCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHCHHHHCCCCCCCCCCCEEEE
IPVSIYCADNQDRFNQVMHNLSGLLLSDDPSDNGKEYPLVFGFEPKVTYWGHITAISDPA
EEEEEEECCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEECCCC
PINPGMYDMTLTITFVQSDPRATLPQVEKPLNNGLNTITVDGTARTAPVVQVVPKRPLKY
CCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEEE
IGFNLNGGQFGLGPETPDDQANAIQPDTDVLNDPIASMAMWTNDANAISGIRTDGNYKYQ
EEEECCCCEECCCCCCCCCCCCCCCCCHHHHCCCHHHHEEECCCCCHHCCEEECCCEEEE
GSAQIDENSTSMRLAFANGSKDFGPISDNPPDAWLGPTYRYTGMTQSLTNYRVRTGLHHI
CCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
RHQGTHNGRAMGKVQFSLLDASGNTIGRFVIGDHMEGGKTYATLQLCKPGSNFKDGNYKT
HHCCCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEE
LYWGYGPSGAFYNKRDQKVNIKTGTTTKTVTKTSRSKRGKVTKKTIKETVNKYATVVNKH
EEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHCCC
EGNALTNAWVFMDMTKAGNVYTWELHQYSPYTGQPYHDRNQRLIVSGRWVDTNHEFDSAL
CCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHH
GGFGQTFLKHPITEDKEKVPYVVPYMALTDIQVWQHNQPQPNEPTYIANAGEEIVMDCEA
HHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEECCC
DTVTVNGRLVSPVWSTDYPQLKPGVNGLTMVGDLDDAQMTLKYLPKLL
CEEEECCEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA