Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492742

Identifier: 116492742

GI number: 116492742

Start: 988402

End: 989460

Strand: Reverse

Name: 116492742

Synonym: PEPE_0979

Alternate gene names: NA

Gene position: 989460-988402 (Counterclockwise)

Preceding gene: 116492743

Following gene: 116492741

Centisome position: 54.0

GC content: 33.71

Gene sequence:

>1059_bases
ATGCGCCATCTTAGTATAAATAATCAGTACATTAAAAGTAGATTACTTAGTATTATTCTAATTTATATAATGACGTTGTT
GCTAATACTTATTTTTCCAAATTCAATTAATGCGAGTGGAAAAGTAAATAATCAAGTAACGTTTAATGCTGAAGCAATTT
TACCGAAAAATCAGCATTCCGAAGTTAGTTACTACGACTTACGGGTACGTCCAGGAGCTACGCAAAAGTTATTTATTCGA
CTTCGTAACTTAACCAATGCAAAGCAAACCATTATGGTTAAAACTAATAATGCGATAACTAATCAGAATGGAGCTATTGA
TTATTCTAAATCAAACGCCCCATTACTAGGCGGTCCCACTTTTAAACAGCTTATTTCAGGACCACAAACGGTCTTACTTA
AGCCTAAGGAAGTTCGAAGAGTTAGCTTTCAGTTGAAGATTCCACCAAAAGGTTTTAAAGGAACGGTTTTAGGAGGATTT
TATTGTTACACAAAACCAGTTAAGGCTGCCACTAGTACATCAGGTTTAAGTTTGACCAATAATTTTGCTTATACCATTGG
CGCAAAGTTAGAGTGTACAAGCTCCAAAATACAACCTAAGTTAAGTTTGATAAAGGCTACACCAGGATTAGATAACGGCT
ATTTATCAATTTTTGCTACTTTACAAAATGCAGCTCCTGTATTGTTGAGTAAATTAGACATGCGGGCCACCGTAACCCAG
AAAAATCACCATGAAATTTTAAAAAGAACACATAAGAAAATCTCGATTGCACCTCGAACACGTTTTCGACTGCCCATTAG
TTGGAATGATGAACCCTTAAAAAATGGAAGATATGTGTTAACCATCGCTTTAAGTAGTTCTACGGGTAAGAAATGGCAAC
TTAGTCGGGAATTTAAAATTACAGGAGACGATGCCAAATTAAATCAAAAGGCCGTTGAACTTAAAAAAACAGATAATAAA
TTGTTTTATTTAATAATAGGACTTTTGATTGGAATAATTGTAATTTTGAGCGGTTATATTTATTACGTGAAACAGAAAAA
TAATAAAACGGAGAAGTAA

Upstream 100 bases:

>100_bases
GAAGGTAAAAATGGTAATAACGAAAATGTTAAACTCCATGTACCACGTGCAGGAGTTGAAGCGCAAAGTTATTCAGCCGA
GTTAACATGGGTATTGACCG

Downstream 100 bases:

>100_bases
GATGAAATTTAGGGGAGGAATAATATTATTTACATTAATACTTAACATTAATGGAATTGCGTTAGCTAACGAACCTACTA
ATAGTAAAATCGGGATTACT

Product: cell surface protein

Products: NA

Alternate protein names: C-Terminal Membrane Anchored Cell Surface Protein; Secreted Protein

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MRHLSINNQYIKSRLLSIILIYIMTLLLILIFPNSINASGKVNNQVTFNAEAILPKNQHSEVSYYDLRVRPGATQKLFIR
LRNLTNAKQTIMVKTNNAITNQNGAIDYSKSNAPLLGGPTFKQLISGPQTVLLKPKEVRRVSFQLKIPPKGFKGTVLGGF
YCYTKPVKAATSTSGLSLTNNFAYTIGAKLECTSSKIQPKLSLIKATPGLDNGYLSIFATLQNAAPVLLSKLDMRATVTQ
KNHHEILKRTHKKISIAPRTRFRLPISWNDEPLKNGRYVLTIALSSSTGKKWQLSREFKITGDDAKLNQKAVELKKTDNK
LFYLIIGLLIGIIVILSGYIYYVKQKNNKTEK

Sequences:

>Translated_352_residues
MRHLSINNQYIKSRLLSIILIYIMTLLLILIFPNSINASGKVNNQVTFNAEAILPKNQHSEVSYYDLRVRPGATQKLFIR
LRNLTNAKQTIMVKTNNAITNQNGAIDYSKSNAPLLGGPTFKQLISGPQTVLLKPKEVRRVSFQLKIPPKGFKGTVLGGF
YCYTKPVKAATSTSGLSLTNNFAYTIGAKLECTSSKIQPKLSLIKATPGLDNGYLSIFATLQNAAPVLLSKLDMRATVTQ
KNHHEILKRTHKKISIAPRTRFRLPISWNDEPLKNGRYVLTIALSSSTGKKWQLSREFKITGDDAKLNQKAVELKKTDNK
LFYLIIGLLIGIIVILSGYIYYVKQKNNKTEK
>Mature_352_residues
MRHLSINNQYIKSRLLSIILIYIMTLLLILIFPNSINASGKVNNQVTFNAEAILPKNQHSEVSYYDLRVRPGATQKLFIR
LRNLTNAKQTIMVKTNNAITNQNGAIDYSKSNAPLLGGPTFKQLISGPQTVLLKPKEVRRVSFQLKIPPKGFKGTVLGGF
YCYTKPVKAATSTSGLSLTNNFAYTIGAKLECTSSKIQPKLSLIKATPGLDNGYLSIFATLQNAAPVLLSKLDMRATVTQ
KNHHEILKRTHKKISIAPRTRFRLPISWNDEPLKNGRYVLTIALSSSTGKKWQLSREFKITGDDAKLNQKAVELKKTDNK
LFYLIIGLLIGIIVILSGYIYYVKQKNNKTEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39396; Mature: 39396

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLSINNQYIKSRLLSIILIYIMTLLLILIFPNSINASGKVNNQVTFNAEAILPKNQHS
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCC
EVSYYDLRVRPGATQKLFIRLRNLTNAKQTIMVKTNNAITNQNGAIDYSKSNAPLLGGPT
CEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEECCCCCCEECCCH
FKQLISGPQTVLLKPKEVRRVSFQLKIPPKGFKGTVLGGFYCYTKPVKAATSTSGLSLTN
HHHHHCCCCEEEECCHHHEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEC
NFAYTIGAKLECTSSKIQPKLSLIKATPGLDNGYLSIFATLQNAAPVLLSKLDMRATVTQ
CEEEEECCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEHHCCHHHHHHHHCCEEEECC
KNHHEILKRTHKKISIAPRTRFRLPISWNDEPLKNGRYVLTIALSSSTGKKWQLSREFKI
CHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEE
TGDDAKLNQKAVELKKTDNKLFYLIIGLLIGIIVILSGYIYYVKQKNNKTEK
ECCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
>Mature Secondary Structure
MRHLSINNQYIKSRLLSIILIYIMTLLLILIFPNSINASGKVNNQVTFNAEAILPKNQHS
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCC
EVSYYDLRVRPGATQKLFIRLRNLTNAKQTIMVKTNNAITNQNGAIDYSKSNAPLLGGPT
CEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEECCCCCCEECCCH
FKQLISGPQTVLLKPKEVRRVSFQLKIPPKGFKGTVLGGFYCYTKPVKAATSTSGLSLTN
HHHHHCCCCEEEECCHHHEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEC
NFAYTIGAKLECTSSKIQPKLSLIKATPGLDNGYLSIFATLQNAAPVLLSKLDMRATVTQ
CEEEEECCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEHHCCHHHHHHHHCCEEEECC
KNHHEILKRTHKKISIAPRTRFRLPISWNDEPLKNGRYVLTIALSSSTGKKWQLSREFKI
CHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEE
TGDDAKLNQKAVELKKTDNKLFYLIIGLLIGIIVILSGYIYYVKQKNNKTEK
ECCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA