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The map label for this gene is smf [H]

Identifier: 116492733

GI number: 116492733

Start: 975739

End: 976599

Strand: Reverse

Name: smf [H]

Synonym: PEPE_0970

Alternate gene names: 116492733

Gene position: 976599-975739 (Counterclockwise)

Preceding gene: 116492734

Following gene: 116492732

Centisome position: 53.3

GC content: 39.37

Gene sequence:

>861_bases
ATGGAAATACGTGATTTTTTGATTAGAGTAAAAGTGGGGACGAATTTAGGCATTAAAAAGCAGTATCAAATTTACCAAGA
AATTCGTAAAAGCCCCGAATTATCCATTGCAGAGTGGATTGGAACAACGAAACTAATTAAGGAAAGTCAAAAAGATGAAT
TAACTGCCACATTACAAAGTGAACAACTAACCCACGAAATTCAAATTAATGAACAAAGTGGGGGAATTCTAACCATTCTA
GATGAAATGTACCCTAAGCTATTGCGGGAGATATATTGCCCACCTACAGTTTTGTTTTACAATGGAAATCTATCGCTACT
AAGCCATCAACGTACTATTGCAATTGTAGGCGCCAGGATGATGACGAGTTATGGTGAACAAGCCATTAAATGTTTAATTC
CGGGCGTAGTGGCTAATCAATTAACCACCGTTAGTGGTTTAGCTAAAGGAGTTGATGCGTTGGTTCACGAAGCAACTTTA
GCAAATGCAGGGTCTACCATTGCCGTAATTGGAAATGGGCTCGATATTACCTATCCTAAGCAAAATGCTCAGCTTCAAAA
TCAAATTCAAAAAGAAGGTTTAATTCTGAGTGAATATCCCCAAGGTGCTCGACCATTAAGACATCATTTTGTAGAACGTA
ACCGAATTATTGCCGGATTGACCACCGCAACATGCGTAGTGGAAGCAAGAAAGAATTCTGGGAGCTTAATCACGGCTAGT
CTGGCACTCACGGAAAATCGAAATGTTTTAGCAATTCCGGGGAGTATTTTCAGTGGTAATAGCCAAGGAACCAACCAGTT
AATTGCATCTGGTGCTCGGCCATTAATCGAATTGGATGACGTTCTAGAAGAAGTTTTGTAA

Upstream 100 bases:

>100_bases
GGAGTAACCCCCATCCATCGTCAGACTTTTGAACCGGTACCTGAATTTTTAATAAAATAAATTAACCTAAAAACACGTAA
AGTACATTTGAGGTGATCAA

Downstream 100 bases:

>100_bases
GGAAAATTGTATTTTTAGGGCGCAGAGGGCGCTATGTAGAATTTCATCGTCTAGGAAGTTATACTTGTATATGTAAATAT
TAAATTTTGAGGTATATGCA

Product: Rossmann fold nucleotide-binding protein for DNA uptake

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQSEQLTHEIQINEQSGGILTIL
DEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGARMMTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATL
ANAGSTIAVIGNGLDITYPKQNAQLQNQIQKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLITAS
LALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEVL

Sequences:

>Translated_286_residues
MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQSEQLTHEIQINEQSGGILTIL
DEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGARMMTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATL
ANAGSTIAVIGNGLDITYPKQNAQLQNQIQKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLITAS
LALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEVL
>Mature_286_residues
MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQSEQLTHEIQINEQSGGILTIL
DEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGARMMTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATL
ANAGSTIAVIGNGLDITYPKQNAQLQNQIQKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLITAS
LALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEVL

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=203, Percent_Identity=39.4088669950739, Blast_Score=142, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 31288; Mature: 31288

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQS
CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EQLTHEIQINEQSGGILTILDEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGARM
HHCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCEEEEHHHHH
MTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATLANAGSTIAVIGNGLDITYPK
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCC
QNAQLQNQIQKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLITAS
CCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCEEEEEHHEEEEEEECCCCCCEEEEE
LALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEVL
EEEECCCCEEEECCCEECCCCCCHHHHHHCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MEIRDFLIRVKVGTNLGIKKQYQIYQEIRKSPELSIAEWIGTTKLIKESQKDELTATLQS
CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EQLTHEIQINEQSGGILTILDEMYPKLLREIYCPPTVLFYNGNLSLLSHQRTIAIVGARM
HHCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCEEEEHHHHH
MTSYGEQAIKCLIPGVVANQLTTVSGLAKGVDALVHEATLANAGSTIAVIGNGLDITYPK
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCC
QNAQLQNQIQKEGLILSEYPQGARPLRHHFVERNRIIAGLTTATCVVEARKNSGSLITAS
CCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCEEEEEHHEEEEEEECCCCCCEEEEE
LALTENRNVLAIPGSIFSGNSQGTNQLIASGARPLIELDDVLEEVL
EEEECCCCEEEECCCEECCCCCCHHHHHHCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]