Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is glxK [H]

Identifier: 116492718

GI number: 116492718

Start: 955377

End: 956516

Strand: Reverse

Name: glxK [H]

Synonym: PEPE_0955

Alternate gene names: 116492718

Gene position: 956516-955377 (Counterclockwise)

Preceding gene: 116492719

Following gene: 116492717

Centisome position: 52.2

GC content: 40.61

Gene sequence:

>1140_bases
ATGAAATTTGTTATTGCACCAGATTCATTTAAGGGTGGATTAACTGCCAAACAAGCAGCCATCGCAATCCAAAATGGTAT
TGCTCGGGTTTATCCGAAGGCTGATTACACGTTAGTCCCTATGGCAGATGGGGGAGAAGGAACCGTGCAAGCACTGGTTG
ATGCTACTAATGGAAAATTAATTACCGAAAAAGTGACTGGTCCATTAGGAGATCCAGTAGAAGCTACATTTGGTATCTTA
GGTGATCATAAAACCGCGGTAATTGAGATGTCCCAAGCAAGTGGTATTCAATTTATTAATCAAAATACACAAAATCCTTT
AATAACTACAACCTATGGAACCGGAGAATTAATTTTAAAGGCTTTAGATTATCATATTTCAAAGCTGATTATTGGAATCG
GAGGAAGTGCCACTAATGATGGAGGGGCTGGAATGGCTCAAGCCATCGGGGTCCATTTATTGGATAATAAGCATCATGAA
ATTGGTCGTGGAGGTGAAGCACTAAAGCATTTAGCTCAAATTGACATGACTGACATTGATCCGCGTTTAGCTAAAGTCCA
ACTTTTAATCGCTTCAGACGTGACGAATCCTTTAGTTGGCCCAAAGGGAGCATCCGTAGTTTTTGGACCCCAAAAAGGCG
CGACGCCGGCAATGATCCGAATTTTAGATGAAAGTCTCACGCATTATGCTGAAATTATTAAACGCGATTTAAATCAAGAC
TTAGCTAATTATCCTGGAGCAGGTGCAGCTGGGGGGCTAGGTACGGGCTTACTAGCTTTTACCAACGCATCTATCAAAAA
GGGAATTGATATTGTTACAGAATATAGCGGACTTAAGGAACAAGCTCAAGGAGCTGATTTTGTTTTTACCGGTGAAGGTG
GTGTTGATTATCAAACGAAGTTTGGTAAAACGCCTTATGGAGTGGCATTGGCAACTAAATCTGTTGCTGCAAGCGCTCCA
GTAATTGTAATCACTGGTAATATTGGTGAAGGTATCGATGAATTGTATTCAGATAAAGCAATCGATGCGGTGTTTTCAAG
TGTGTCAGGTGTTAAAACTTTAGAGCAAGCATTGATCGATGCTCCGCATGATATTGCCCAAGTTGCTGAGAATATTGCCC
GATTAATTAATAAGTTTTAA

Upstream 100 bases:

>100_bases
ACGAATACTAAAACAGATGGCTTAAGGTCATCTGTTTTTTATTTCCACTGAAATAGGATTAGATATACTAAAATTCATAA
CCTAGGAGTAAATATATAAT

Downstream 100 bases:

>100_bases
CTTGAGCTTTTATTTTGTAAGCATCTTAATCCCCTAAAAGACATGAATGTTTTATAATCGATGTTATAGGTAAGGGGGAA
TTTAAATGAATTCAAATAAC

Product: glycerate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKLITEKVTGPLGDPVEATFGIL
GDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILKALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHE
IGRGGEALKHLAQIDMTDIDPRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD
LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTKFGKTPYGVALATKSVAASAP
VIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALIDAPHDIAQVAENIARLINKF

Sequences:

>Translated_379_residues
MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKLITEKVTGPLGDPVEATFGIL
GDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILKALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHE
IGRGGEALKHLAQIDMTDIDPRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD
LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTKFGKTPYGVALATKSVAASAP
VIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALIDAPHDIAQVAENIARLINKF
>Mature_379_residues
MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKLITEKVTGPLGDPVEATFGIL
GDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILKALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHE
IGRGGEALKHLAQIDMTDIDPRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD
LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTKFGKTPYGVALATKSVAASAP
VIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALIDAPHDIAQVAENIARLINKF

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=373, Percent_Identity=50.1340482573727, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=46.8085106382979, Blast_Score=309, Evalue=1e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 39417; Mature: 39417

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKL
CEEEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCEEEEEEECCCCEE
ITEKVTGPLGDPVEATFGILGDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILK
EEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCHHHHHH
ALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHEIGRGGEALKHLAQIDMTDID
HHHHHHHHEEEECCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
PRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD
CCHHHEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTK
HHHCCCCCCCCCCHHHHHHCCCCHHHHCCHHHHHHCCHHHHHCCCCEEEECCCCCCCHHH
FGKTPYGVALATKSVAASAPVIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALID
CCCCCCCEEEEHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APHDIAQVAENIARLINKF
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFVIAPDSFKGGLTAKQAAIAIQNGIARVYPKADYTLVPMADGGEGTVQALVDATNGKL
CEEEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCEEEEEEECCCCEE
ITEKVTGPLGDPVEATFGILGDHKTAVIEMSQASGIQFINQNTQNPLITTTYGTGELILK
EEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCHHHHHH
ALDYHISKLIIGIGGSATNDGGAGMAQAIGVHLLDNKHHEIGRGGEALKHLAQIDMTDID
HHHHHHHHEEEECCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
PRLAKVQLLIASDVTNPLVGPKGASVVFGPQKGATPAMIRILDESLTHYAEIIKRDLNQD
CCHHHEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LANYPGAGAAGGLGTGLLAFTNASIKKGIDIVTEYSGLKEQAQGADFVFTGEGGVDYQTK
HHHCCCCCCCCCCHHHHHHCCCCHHHHCCHHHHHHCCHHHHHCCCCEEEECCCCCCCHHH
FGKTPYGVALATKSVAASAPVIVITGNIGEGIDELYSDKAIDAVFSSVSGVKTLEQALID
CCCCCCCEEEEHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APHDIAQVAENIARLINKF
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132; 10086841 [H]