| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is crcB [H]
Identifier: 116492712
GI number: 116492712
Start: 950270
End: 950632
Strand: Reverse
Name: crcB [H]
Synonym: PEPE_0948
Alternate gene names: 116492712
Gene position: 950632-950270 (Counterclockwise)
Preceding gene: 116492714
Following gene: 116492709
Centisome position: 51.88
GC content: 34.99
Gene sequence:
>363_bases ATGATTCTAGTTTATGTTGGTATGGGTACGGCCCTTGGTGCTGTTGCTCGTCTTTTTATAACTACGCACTTAAACCAAAC ATTTAAAAAACACGCCTTTCCTTGGTCAACTTTTATTGTAAATATGATTGCTTGTTTTTTGATTGGCTTCTTAACCGTTA CTATTCACGATTCTAAGCTTAAATTGTTATTAATAAGTGGTTTTCTCGGAGGGCTTTCGACGTTCTCTACCTTTGCTAAC GAAATAGTCACTCTAGGACAAGATAAGACAACAAAAAAACTTGCACTACTTTACAGTTGTGCAAGTTTAGGATTTGGAAT CATACTTGTTTATCTAGGAATGCAGATTTATGCCTTTGTATAA
Upstream 100 bases:
>100_bases TTTGCTTACATCCGTTATTCTATCCTTAATTTTAGCCAATTTCGGACAATTTCTGGGTGGTAAACTACTCAAACATTATC GAAAGGATTGGTGATATTTC
Downstream 100 bases:
>100_bases TCAATTACCCAAATTAGAGCGATCGCTTTTTCACCCAAATGGGTTCCAATCACAGGACCAAAATAAGAAATATCAATTGG CAATTGAGGATATTTTTCCT
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MILVYVGMGTALGAVARLFITTHLNQTFKKHAFPWSTFIVNMIACFLIGFLTVTIHDSKLKLLLISGFLGGLSTFSTFAN EIVTLGQDKTTKKLALLYSCASLGFGIILVYLGMQIYAFV
Sequences:
>Translated_120_residues MILVYVGMGTALGAVARLFITTHLNQTFKKHAFPWSTFIVNMIACFLIGFLTVTIHDSKLKLLLISGFLGGLSTFSTFAN EIVTLGQDKTTKKLALLYSCASLGFGIILVYLGMQIYAFV >Mature_120_residues MILVYVGMGTALGAVARLFITTHLNQTFKKHAFPWSTFIVNMIACFLIGFLTVTIHDSKLKLLLISGFLGGLSTFSTFAN EIVTLGQDKTTKKLALLYSCASLGFGIILVYLGMQIYAFV
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13133; Mature: 13133
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVYVGMGTALGAVARLFITTHLNQTFKKHAFPWSTFIVNMIACFLIGFLTVTIHDSKL CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCH KLLLISGFLGGLSTFSTFANEIVTLGQDKTTKKLALLYSCASLGFGIILVYLGMQIYAFV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILVYVGMGTALGAVARLFITTHLNQTFKKHAFPWSTFIVNMIACFLIGFLTVTIHDSKL CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCH KLLLISGFLGGLSTFSTFANEIVTLGQDKTTKKLALLYSCASLGFGIILVYLGMQIYAFV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA