| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is lgt
Identifier: 116492245
GI number: 116492245
Start: 490979
End: 491815
Strand: Direct
Name: lgt
Synonym: PEPE_0442
Alternate gene names: 116492245
Gene position: 490979-491815 (Clockwise)
Preceding gene: 116492244
Following gene: 116492246
Centisome position: 26.79
GC content: 40.62
Gene sequence:
>837_bases GTGAATTTAACGTTAGGAGCACTAAATCCAATTGCCTTTAATCTTGGTGGAATTCAAGTTCATTGGTATGGAATTATCAT TGCGTCAGCAGTGGTGTTAGCGACGATTTTGGCAGTTCAAGAAGCTAAAAGGCGAAGAATCGATCCAGATTCTATCTACG ATTTGATTTTATGGGCCTTACCAGTGGCGATTATTACCGCTCGAATGTATTACGTTATTTTTGAGTGGGGATATTACCAA AACCATGTCGATGAAATTGTACGCGTTTGGGACGGTGGTATTGCCATTTATGGGGCCTTGATTGGGGCTGGAATCGTGGT CTACCTCTTCTGTCGTGCAAATTGGATTCCAGTTTGGTTAATGTTGGATATCATCGCTCCAGTATTGATTATGGCCCAAG GTATTGGTCGATGGGGTAATTTTATGAATCAAGAGGCTTTCGGCAGAATTACTAGCTTAACATTTCTCCAAAGTCTTCAT TTGCCCCATTTTATTATTCAACAAATGCTGATTGATGGAGCCTACCGTCAACCAACTTTTTTATATGAATCGCTTTGGGA CATCTTGGGCTTTATTGTATTGATGAGTTTGAGACATAAAAAACATTTATTCAAACAAGGGGAAGTGTTCTTGTCCTATG TAATTTGGTACGCGTTTGGTCGCTTTTTTGTCGAAGGGATGCGCACTGATAGTTTGATGCTATTAGGCATCCGCGTGTCA CAATGGCTTTCGGTAATACTTTTTATCGGAGCAATTGGTATATTGGTGTTCCGCCGTAAATCGATGCGAGAACGCCTACC AGATTATTTGGAAGGTAATCAGCTTTCACCAAAATGA
Upstream 100 bases:
>100_bases ACTTTAGAGCTAAAAATATGGGATATGATGCAACCAAAGTTTTTGATCGTAACTTAAATGAGTTGATCAAAGATAATTCC CAGAAATAGGAGTGGATTTT
Downstream 100 bases:
>100_bases ACTTGAGTAAAGTACCTTTGTATACGATAATAGAAAGGTACATAAATTATTTTTAAATTTAAGATTGTAAGGGGATTAAC TATGGTAAAAAAAGTTGCAG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNLTLGALNPIAFNLGGIQVHWYGIIIASAVVLATILAVQEAKRRRIDPDSIYDLILWALPVAIITARMYYVIFEWGYYQ NHVDEIVRVWDGGIAIYGALIGAGIVVYLFCRANWIPVWLMLDIIAPVLIMAQGIGRWGNFMNQEAFGRITSLTFLQSLH LPHFIIQQMLIDGAYRQPTFLYESLWDILGFIVLMSLRHKKHLFKQGEVFLSYVIWYAFGRFFVEGMRTDSLMLLGIRVS QWLSVILFIGAIGILVFRRKSMRERLPDYLEGNQLSPK
Sequences:
>Translated_278_residues MNLTLGALNPIAFNLGGIQVHWYGIIIASAVVLATILAVQEAKRRRIDPDSIYDLILWALPVAIITARMYYVIFEWGYYQ NHVDEIVRVWDGGIAIYGALIGAGIVVYLFCRANWIPVWLMLDIIAPVLIMAQGIGRWGNFMNQEAFGRITSLTFLQSLH LPHFIIQQMLIDGAYRQPTFLYESLWDILGFIVLMSLRHKKHLFKQGEVFLSYVIWYAFGRFFVEGMRTDSLMLLGIRVS QWLSVILFIGAIGILVFRRKSMRERLPDYLEGNQLSPK >Mature_278_residues MNLTLGALNPIAFNLGGIQVHWYGIIIASAVVLATILAVQEAKRRRIDPDSIYDLILWALPVAIITARMYYVIFEWGYYQ NHVDEIVRVWDGGIAIYGALIGAGIVVYLFCRANWIPVWLMLDIIAPVLIMAQGIGRWGNFMNQEAFGRITSLTFLQSLH LPHFIIQQMLIDGAYRQPTFLYESLWDILGFIVLMSLRHKKHLFKQGEVFLSYVIWYAFGRFFVEGMRTDSLMLLGIRVS QWLSVILFIGAIGILVFRRKSMRERLPDYLEGNQLSPK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=287, Percent_Identity=26.4808362369338, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_PEDPA (Q03GY4)
Other databases:
- EMBL: CP000422 - RefSeq: YP_803980.1 - STRING: Q03GY4 - GeneID: 4418373 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_0442 - NMPDR: fig|278197.10.peg.410 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: TSHIRVA - ProtClustDB: PRK00052 - BioCyc: PPEN278197:PEPE_0442-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 31933; Mature: 31933
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x133b4d1c)-; HASH(0x162ccf20)-; HASH(0x16baf988)-; HASH(0x413f9f0c)-; HASH(0x1612a3dc)-; HASH(0x16946830)-; HASH(0x1697e600)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTLGALNPIAFNLGGIQVHWYGIIIASAVVLATILAVQEAKRRRIDPDSIYDLILWAL CCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PVAIITARMYYVIFEWGYYQNHVDEIVRVWDGGIAIYGALIGAGIVVYLFCRANWIPVWL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH MLDIIAPVLIMAQGIGRWGNFMNQEAFGRITSLTFLQSLHLPHFIIQQMLIDGAYRQPTF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH LYESLWDILGFIVLMSLRHKKHLFKQGEVFLSYVIWYAFGRFFVEGMRTDSLMLLGIRVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QWLSVILFIGAIGILVFRRKSMRERLPDYLEGNQLSPK HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCH >Mature Secondary Structure MNLTLGALNPIAFNLGGIQVHWYGIIIASAVVLATILAVQEAKRRRIDPDSIYDLILWAL CCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PVAIITARMYYVIFEWGYYQNHVDEIVRVWDGGIAIYGALIGAGIVVYLFCRANWIPVWL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH MLDIIAPVLIMAQGIGRWGNFMNQEAFGRITSLTFLQSLHLPHFIIQQMLIDGAYRQPTF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH LYESLWDILGFIVLMSLRHKKHLFKQGEVFLSYVIWYAFGRFFVEGMRTDSLMLLGIRVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QWLSVILFIGAIGILVFRRKSMRERLPDYLEGNQLSPK HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA