Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is pbuG [H]
Identifier: 116492184
GI number: 116492184
Start: 428628
End: 429974
Strand: Direct
Name: pbuG [H]
Synonym: PEPE_0381
Alternate gene names: 116492184
Gene position: 428628-429974 (Clockwise)
Preceding gene: 116492180
Following gene: 116492186
Centisome position: 23.39
GC content: 40.24
Gene sequence:
>1347_bases ATGGATCAAAAATTGGATGATAATGCTTCATATGGATTATTAGACCGAACGTTTCATCTTACAGAACAACATACTACGGT TAAAAGAGAAATTTTAGCCGGTTTAACGACTTTTGTTTCAATGGCATACATTTTGTTTGTTAATCCTACAATCCTAGGGC AAGCCGGGATGGATAAAGGAGCGGTTTTCACAGCAACGGCCATTTCAGCAATTATCGGCTGTGCGTTGATGGCTTTTCTT GCAAATTATCCGATTGCGATTGCGCCTGGATTGGGTGACAATGCCTTTTTCACTTTCTCAGTTGTTTTAGGAATGGGAAT TCCATGGGAAAAGGCGATGGCCGGAGTATTTATTGCTTCTGTTTTATTCACAATTTTATCCTTCCTCAAAGTACGTGAAA TTGTGATTGATTCAATTTCTAAAGATCTCAAATTAGCTATGGCGGCTGGGATTGGGATCTTCATTGCGTTTATCGGGCTG CAAGGCGGTGGATTAGTTACAGCAAGTAAGACCTCATTAGTTGAGATGGGTTCCTTGTCCGTTCCCACAACGTGGTTAAC CATTTTTGGAATTTTTGTAATCGCGATTTTAATGGCGAAAAAAGTGCCAGGTTCAATCTTTATCGGTTTAGTTTCCACTG CGATTTTAGGGTTGGTGACAGGTTTGATTAAAATGCCGGAGCATTTGATTTCCCTTGCTCCTAGTATGAAACCAACATTT GGAGTGGGAATTGCTCATTTGCCTTCAATCGCTGACCCTGAGATGTGGGCCGTAGTTTTAATCTTATTGCTAGTTGCGTT TTTTGATACCGCTGGTACTTTAATTGGGTTAGCTCAACAAGCTGGAATTATGAAAAACAATAAAATGCCACGAATTGGAC AGGCTCTAATGGCAGATTCAATTTCAATGTTAGCTGGATCAGTAATGGGAACTACACCCACAGCAACTTATGTGGAATCA TCTGCCGGTATTGCAGTTGGTGGACGAACAGGACTGACTTCTCTAACCGTTGGAATCTTGTTTGTATTTAGTATGTTTTT CTCACCACTTTTAACAGTCGTTACAACGCAAGTAACTGCACCAGCTCTAATCGTGGTTGGGGTATTGATGGCTTCTGCGC TTCGTGAAATTAATTGGGATAAATTTGAAATTGCTATGCCAGCCTTCCTCACCATTATTGGAATGCCATTGACTTACAAT ATTTCCTACGGAATGGCATTTGGATTCTTAACTTATCCAATCTTAATGACCGTTGCTGGTCGCCGTAAGGAAGTTAATTA CGTTGTTTGGATTTTAATGGTCGCTTTCGCACTAATGCTATATGTGCTTAATAAACTTCCAAATTAG
Upstream 100 bases:
>100_bases TTATAAGCATCTATAAACGAACATTAGGTGTTGAAAACAACATTAAAGTATGGAATAATATGGAAGTTGATAAAAAAGAT TTTGATGGGGGAACGAAATA
Downstream 100 bases:
>100_bases TATGAAATAAATTAAAAGAGTTGTGATTAAAGACATTTGCCTTTATCACAACTCTTTTTTTATTGGGCCAGTTTACTATG ATGAATTCCATAACTAAAGT
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MDQKLDDNASYGLLDRTFHLTEQHTTVKREILAGLTTFVSMAYILFVNPTILGQAGMDKGAVFTATAISAIIGCALMAFL ANYPIAIAPGLGDNAFFTFSVVLGMGIPWEKAMAGVFIASVLFTILSFLKVREIVIDSISKDLKLAMAAGIGIFIAFIGL QGGGLVTASKTSLVEMGSLSVPTTWLTIFGIFVIAILMAKKVPGSIFIGLVSTAILGLVTGLIKMPEHLISLAPSMKPTF GVGIAHLPSIADPEMWAVVLILLLVAFFDTAGTLIGLAQQAGIMKNNKMPRIGQALMADSISMLAGSVMGTTPTATYVES SAGIAVGGRTGLTSLTVGILFVFSMFFSPLLTVVTTQVTAPALIVVGVLMASALREINWDKFEIAMPAFLTIIGMPLTYN ISYGMAFGFLTYPILMTVAGRRKEVNYVVWILMVAFALMLYVLNKLPN
Sequences:
>Translated_448_residues MDQKLDDNASYGLLDRTFHLTEQHTTVKREILAGLTTFVSMAYILFVNPTILGQAGMDKGAVFTATAISAIIGCALMAFL ANYPIAIAPGLGDNAFFTFSVVLGMGIPWEKAMAGVFIASVLFTILSFLKVREIVIDSISKDLKLAMAAGIGIFIAFIGL QGGGLVTASKTSLVEMGSLSVPTTWLTIFGIFVIAILMAKKVPGSIFIGLVSTAILGLVTGLIKMPEHLISLAPSMKPTF GVGIAHLPSIADPEMWAVVLILLLVAFFDTAGTLIGLAQQAGIMKNNKMPRIGQALMADSISMLAGSVMGTTPTATYVES SAGIAVGGRTGLTSLTVGILFVFSMFFSPLLTVVTTQVTAPALIVVGVLMASALREINWDKFEIAMPAFLTIIGMPLTYN ISYGMAFGFLTYPILMTVAGRRKEVNYVVWILMVAFALMLYVLNKLPN >Mature_448_residues MDQKLDDNASYGLLDRTFHLTEQHTTVKREILAGLTTFVSMAYILFVNPTILGQAGMDKGAVFTATAISAIIGCALMAFL ANYPIAIAPGLGDNAFFTFSVVLGMGIPWEKAMAGVFIASVLFTILSFLKVREIVIDSISKDLKLAMAAGIGIFIAFIGL QGGGLVTASKTSLVEMGSLSVPTTWLTIFGIFVIAILMAKKVPGSIFIGLVSTAILGLVTGLIKMPEHLISLAPSMKPTF GVGIAHLPSIADPEMWAVVLILLLVAFFDTAGTLIGLAQQAGIMKNNKMPRIGQALMADSISMLAGSVMGTTPTATYVES SAGIAVGGRTGLTSLTVGILFVFSMFFSPLLTVVTTQVTAPALIVVGVLMASALREINWDKFEIAMPAFLTIIGMPLTYN ISYGMAFGFLTYPILMTVAGRRKEVNYVVWILMVAFALMLYVLNKLPN
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=445, Percent_Identity=39.7752808988764, Blast_Score=329, Evalue=2e-91, Organism=Escherichia coli, GI1790150, Length=444, Percent_Identity=38.963963963964, Blast_Score=308, Evalue=5e-85, Organism=Escherichia coli, GI1790499, Length=435, Percent_Identity=35.1724137931034, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI48994909, Length=438, Percent_Identity=34.9315068493151, Blast_Score=202, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 47609; Mature: 47609
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKLDDNASYGLLDRTFHLTEQHTTVKREILAGLTTFVSMAYILFVNPTILGQAGMDKG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC AVFTATAISAIIGCALMAFLANYPIAIAPGLGDNAFFTFSVVLGMGIPWEKAMAGVFIAS CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH VLFTILSFLKVREIVIDSISKDLKLAMAAGIGIFIAFIGLQGGGLVTASKTSLVEMGSLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCC VPTTWLTIFGIFVIAILMAKKVPGSIFIGLVSTAILGLVTGLIKMPEHLISLAPSMKPTF CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GVGIAHLPSIADPEMWAVVLILLLVAFFDTAGTLIGLAQQAGIMKNNKMPRIGQALMADS CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHH ISMLAGSVMGTTPTATYVESSAGIAVGGRTGLTSLTVGILFVFSMFFSPLLTVVTTQVTA HHHHHHHHCCCCCCHHHEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALIVVGVLMASALREINWDKFEIAMPAFLTIIGMPLTYNISYGMAFGFLTYPILMTVAG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCC RRKEVNYVVWILMVAFALMLYVLNKLPN CCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDQKLDDNASYGLLDRTFHLTEQHTTVKREILAGLTTFVSMAYILFVNPTILGQAGMDKG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC AVFTATAISAIIGCALMAFLANYPIAIAPGLGDNAFFTFSVVLGMGIPWEKAMAGVFIAS CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH VLFTILSFLKVREIVIDSISKDLKLAMAAGIGIFIAFIGLQGGGLVTASKTSLVEMGSLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCC VPTTWLTIFGIFVIAILMAKKVPGSIFIGLVSTAILGLVTGLIKMPEHLISLAPSMKPTF CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GVGIAHLPSIADPEMWAVVLILLLVAFFDTAGTLIGLAQQAGIMKNNKMPRIGQALMADS CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHH ISMLAGSVMGTTPTATYVESSAGIAVGGRTGLTSLTVGILFVFSMFFSPLLTVVTTQVTA HHHHHHHHCCCCCCHHHEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALIVVGVLMASALREINWDKFEIAMPAFLTIIGMPLTYNISYGMAFGFLTYPILMTVAG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCC RRKEVNYVVWILMVAFALMLYVLNKLPN CCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 11591660 [H]