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The map label for this gene is ycsE [H]

Identifier: 116492148

GI number: 116492148

Start: 392323

End: 393123

Strand: Direct

Name: ycsE [H]

Synonym: PEPE_0345

Alternate gene names: 116492148

Gene position: 392323-393123 (Clockwise)

Preceding gene: 116492143

Following gene: 116492150

Centisome position: 21.41

GC content: 39.83

Gene sequence:

>801_bases
GTGTTTATGGATATTGATGGAACCTTAATCGATAACCATCAGAACGTTTTACCGGAGACGAAGAGAACCATCGAAAAATT
ACAACAACGCGGTGTAATTTTCTATATTGCGACGGGACGGATGCTTTCGCTAGCTGAACTAATTCGCAATAAAATCAACG
ATCAAGTTGAAATTATAGCTTCAAATGGATCTGTATATCAAAAAGGACATCATTTTCATAAGGAGCATTTAGGATGGAAT
GCACTTAAGGAAATCTATAATATAACGTCAGAACTGGGTCTTTCGACTAACTTTTTCACAACAGATATGACGTATTACAC
ACGTGAAAAGCCGTGGATGTTGAGTCGTTTAGCTCGAGTTCGGGTTATGGCCGATAAGACTGGTAACCGACGTTTTGAGA
AAGTTAGAGACCTGGAACATTTACACCAACTTAGTAGTCAAATTATCAATGGGATTACCATTGATAAGACTAAGTCGGAA
CGGCTAGATGAAGCGCGTGAAAAAATGGAGGCAACTGGGTTACTTAAGGTATCGTCGTCTTCACCAAACAACTTGGAATT
AATTCCTAGGCGAATTTCAAAAGCAACTGCTGTACGGGCAATTATGGATAAATATGGCATCCCGCTTGAACGCACAATTG
CTTTTGGAAATGACATGAATGACCTAGAAATGATTAAAGCCGTTGGCACGGGGGTTGCGATGGGGAATAGTCCTCAAATC
CTAAAAGACGAAGCCGATGCGGTTACGGATAGTAATGTGGAAAACGGGATTGGGAATTTTTTGGAGTCATATTTTAAATA
A

Upstream 100 bases:

>100_bases
TAATGTTATGCAAAAGTAAGATGTGATATGGAAACGGTAACAAAAAGTAGTACAATGATAGTTAATAATGTAAGGGGTGA
AGAATTTGGAGCCATATCTT

Downstream 100 bases:

>100_bases
ATAAAAAAGGAAGTAGCCTTTAAAGGACTACTTCCCTTTTTATTTAATCAAACAAAGTCTCGGTTATCGCGACAACAGGA
GGGACATCAGCGAGTTCCTC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MFMDIDGTLIDNHQNVLPETKRTIEKLQQRGVIFYIATGRMLSLAELIRNKINDQVEIIASNGSVYQKGHHFHKEHLGWN
ALKEIYNITSELGLSTNFFTTDMTYYTREKPWMLSRLARVRVMADKTGNRRFEKVRDLEHLHQLSSQIINGITIDKTKSE
RLDEAREKMEATGLLKVSSSSPNNLELIPRRISKATAVRAIMDKYGIPLERTIAFGNDMNDLEMIKAVGTGVAMGNSPQI
LKDEADAVTDSNVENGIGNFLESYFK

Sequences:

>Translated_266_residues
MFMDIDGTLIDNHQNVLPETKRTIEKLQQRGVIFYIATGRMLSLAELIRNKINDQVEIIASNGSVYQKGHHFHKEHLGWN
ALKEIYNITSELGLSTNFFTTDMTYYTREKPWMLSRLARVRVMADKTGNRRFEKVRDLEHLHQLSSQIINGITIDKTKSE
RLDEAREKMEATGLLKVSSSSPNNLELIPRRISKATAVRAIMDKYGIPLERTIAFGNDMNDLEMIKAVGTGVAMGNSPQI
LKDEADAVTDSNVENGIGNFLESYFK
>Mature_266_residues
MFMDIDGTLIDNHQNVLPETKRTIEKLQQRGVIFYIATGRMLSLAELIRNKINDQVEIIASNGSVYQKGHHFHKEHLGWN
ALKEIYNITSELGLSTNFFTTDMTYYTREKPWMLSRLARVRVMADKTGNRRFEKVRDLEHLHQLSSQIINGITIDKTKSE
RLDEAREKMEATGLLKVSSSSPNNLELIPRRISKATAVRAIMDKYGIPLERTIAFGNDMNDLEMIKAVGTGVAMGNSPQI
LKDEADAVTDSNVENGIGNFLESYFK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=279, Percent_Identity=28.673835125448, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30208; Mature: 30208

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMDIDGTLIDNHQNVLPETKRTIEKLQQRGVIFYIATGRMLSLAELIRNKINDQVEIIA
CEECCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCEEEEEE
SNGSVYQKGHHFHKEHLGWNALKEIYNITSELGLSTNFFTTDMTYYTREKPWMLSRLARV
CCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHH
RVMADKTGNRRFEKVRDLEHLHQLSSQIINGITIDKTKSERLDEAREKMEATGLLKVSSS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEECCC
SPNNLELIPRRISKATAVRAIMDKYGIPLERTIAFGNDMNDLEMIKAVGTGVAMGNSPQI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCH
LKDEADAVTDSNVENGIGNFLESYFK
HHCCHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFMDIDGTLIDNHQNVLPETKRTIEKLQQRGVIFYIATGRMLSLAELIRNKINDQVEIIA
CEECCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCEEEEEE
SNGSVYQKGHHFHKEHLGWNALKEIYNITSELGLSTNFFTTDMTYYTREKPWMLSRLARV
CCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHH
RVMADKTGNRRFEKVRDLEHLHQLSSQIINGITIDKTKSERLDEAREKMEATGLLKVSSS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEECCC
SPNNLELIPRRISKATAVRAIMDKYGIPLERTIAFGNDMNDLEMIKAVGTGVAMGNSPQI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCH
LKDEADAVTDSNVENGIGNFLESYFK
HHCCHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]