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The map label for this gene is yfkH [H]

Identifier: 116492143

GI number: 116492143

Start: 388300

End: 389202

Strand: Direct

Name: yfkH [H]

Synonym: PEPE_0340

Alternate gene names: 116492143

Gene position: 388300-389202 (Clockwise)

Preceding gene: 116492142

Following gene: 116492148

Centisome position: 21.19

GC content: 36.21

Gene sequence:

>903_bases
ATGGATTTTAAAGTAGTTTTTAGAAAAACAAAAACGTTTTTAAGTGCTTTACTGAAGCGGTTCAACGATTCGGAAGTTGT
AAATAATTCGATTGTTTTAGCGTATTATTTACTACTTTCATTTTTTCCAATGGTAATGTTGATGGGATCGTTATTACCAT
TGTTTGATATCAAAGTGAACACGGTGCTAGAATACATTGAAACAGTGGTACCGGTGACAATTTACAACATTACCGAGCCC
ATTGTTAAAGATTTTCTGGGGAGTGGAAATGGCGAGTTACTATCGTTCAGTTTGTTGTTGACAATCTATTCAGCTAGCCA
AGCTGTGGCTGCTTTTCAACGGACAATTAATCGAGCTTATGATGTAGCTAAACATCAAAATCCCATTGTTAATCGGATTG
TCGCGTTTGTTTTGACCGTAATAATCATTGCTATTATGGGGATTTTGGTATTCCTCTTTAGTTTTGGACAAACGTTGATT
AGTTATTTAACCCCAATTCTGAATTTACCAACGCATCTGTTTGATTTGATCGGACAGTTGAAATGGCCTGTAACTATCGT
GGGCTTATTTGTTGGATTAGCGTTGTTATACTACTTGGTGCCTAATGCTAAAATCAAATTTAAGTACGTTATTCCAGGAT
CAATTGCCGCAACCATTGGAACAATGATTATCTCGCAATTTTTCTCATTCTACTTACGAATTTTTGCCCGTTCAGTAACC
AGTTATAAGACTTTGGGAACCTTTATTGCGATTATGTTCTGGCTAAATTTCTCGGCAATGGTAGTTATGTTTGGTGGAGT
TTTGAACGCTACCTGGCAAGAGCTACGTGAAGGAAAGATTGTGGAAACCTCCGGCAGTCTTAGAAAAGTAGCTGGTAAGT
ATAAAATTAAAATCAAAAAATAA

Upstream 100 bases:

>100_bases
CTTTTCTTTGTGATTACAATTTTAGGTTGGATTATCACGATGTTGGCAGGCAGAAACTTAAACTTAAGCAAACATATTGT
AAAATAATTGGGGAATTCAA

Downstream 100 bases:

>100_bases
AAGTTATCCAACAGTGGAATTAACCGCTGTGGATAACTTTTTTATTTTTCTGAATAAACCACTTCAAAAACTTCGGAAAC
CACCGGCTTATCCTCTGTAA

Product: ribonuclease BN-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDFKVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIKVNTVLEYIETVVPVTIYNITEP
IVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAYDVAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLI
SYLTPILNLPTHLFDLIGQLKWPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVT
SYKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGKIVETSGSLRKVAGKYKIKIKK

Sequences:

>Translated_300_residues
MDFKVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIKVNTVLEYIETVVPVTIYNITEP
IVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAYDVAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLI
SYLTPILNLPTHLFDLIGQLKWPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVT
SYKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGKIVETSGSLRKVAGKYKIKIKK
>Mature_300_residues
MDFKVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIKVNTVLEYIETVVPVTIYNITEP
IVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAYDVAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLI
SYLTPILNLPTHLFDLIGQLKWPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVT
SYKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGKIVETSGSLRKVAGKYKIKIKK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 33728; Mature: 33728

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIKVN
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLEYIETVVPVTIYNITEPIVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLISYLTPILNLPTHLFDLIGQL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
KWPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVT
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGKIVETSGSLRKVAGKYKIKIKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHEEEECC
>Mature Secondary Structure
MDFKVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIKVN
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLEYIETVVPVTIYNITEPIVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLISYLTPILNLPTHLFDLIGQL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
KWPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVT
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGKIVETSGSLRKVAGKYKIKIKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]